Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNU7-115P-201ENST00000516433 55 ntBASIC1.73□□□□□ -2.13
CLDN2P57739 SNORA31.10-201ENST00000516482 106 ntBASIC1.73□□□□□ -2.13
CLDN2P57739 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
CLDN2P57739 AC011604.1-201ENST00000545978 196 ntBASIC1.73□□□□□ -2.13
CLDN2P57739 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
CLDN2P57739 U2.14-201ENST00000615943 113 ntBASIC1.73□□□□□ -2.13
CLDN2P57739 7SK.10-201ENST00000621414 298 ntBASIC1.73□□□□□ -2.13
CLDN2P57739 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDN2P57739 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLDN2P57739 SNORA1B-201ENST00000362535 133 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 Y_RNA.44-201ENST00000362676 108 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 Y_RNA.144-201ENST00000363521 113 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 RNU6-899P-201ENST00000363947 107 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 RNU4-52P-201ENST00000384209 138 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 RNU6-1031P-201ENST00000384773 107 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CLDN2P57739 AC233266.1-201ENST00000454518 96 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN2P57739 Y_RNA.668-201ENST00000516233 93 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 SNORA44.1-201ENST00000517031 108 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 POLR3GP1-201ENST00000594073 261 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 AL929325.1-201ENST00000603096 117 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 AC242852.1-201ENST00000612151 96 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 MIR548AY-201ENST00000617669 107 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 AC244015.1-201ENST00000622301 99 ntBASIC1.72□□□□□ -2.13
CLDN2P57739 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CLDN2P57739 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
CLDN2P57739 RNU6-1272P-201ENST00000362776 107 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 Y_RNA.193-201ENST00000363979 102 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 Y_RNA.217-201ENST00000364214 105 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 Y_RNA.265-201ENST00000364677 108 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 Y_RNA.275-201ENST00000364726 110 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 Y_RNA.338-201ENST00000365320 114 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 Y_RNA.452-201ENST00000384202 108 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 SNORA26.5-201ENST00000391215 123 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 RNA5SP482-201ENST00000391269 118 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 RNA5SP489-201ENST00000410986 109 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 HMGN2P38-201ENST00000423806 265 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN2P57739 HMGN2P19-201ENST00000425149 265 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 SNORD127-201ENST00000458892 86 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 RNU7-141P-201ENST00000459304 62 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 RNU7-34P-201ENST00000459394 64 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 Y_RNA.641-201ENST00000459414 105 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 AL049830.1-201ENST00000468034 425 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 AC024405.2-202ENST00000532731 184 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 AC127455.1-201ENST00000565496 145 ntBASIC1.71□□□□□ -2.14
CLDN2P57739 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN2P57739 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN2P57739 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CLDN2P57739 U8.7-201ENST00000364940 136 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 RNU6-702P-201ENST00000364982 107 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 Y_RNA.352-201ENST00000365439 102 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 RNU6-763P-201ENST00000390865 106 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 JTBP1-201ENST00000441314 247 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 AC117454.1-201ENST00000491120 168 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 MIR4503-201ENST00000582187 83 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 MIR4448-201ENST00000584360 86 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 MIR8074-201ENST00000615081 81 ntBASIC1.7□□□□□ -2.14
CLDN2P57739 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CLDN2P57739 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CLDN2P57739 RNU6-662P-201ENST00000384253 104 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CLDN2P57739 MIR548H3-201ENST00000408771 118 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 RNU2-14P-201ENST00000411053 191 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 Y_RNA.621-201ENST00000411065 96 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 STAG3L5P-204ENST00000443759 179 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 RPL23AP54-201ENST00000495129 419 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 AC004817.2-201ENST00000561794 651 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 MIR4303-201ENST00000581299 66 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 MIR3149-201ENST00000584629 83 ntBASIC1.69□□□□□ -2.14
CLDN2P57739 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CLDN2P57739 Y_RNA.14-201ENST00000362415 103 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 RNU6-144P-201ENST00000383951 107 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 RNU6-1080P-201ENST00000383982 107 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 Y_RNA.562-201ENST00000384695 113 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 MIR676-201ENST00000390702 67 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 RPL30P13-201ENST00000418873 348 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.68□□□□□ -2.14
CLDN2P57739 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN2P57739 RNU6-1132P-201ENST00000459214 107 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 Y_RNA.637-201ENST00000459424 114 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 RPL39P38-201ENST00000467018 153 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 RN7SL274P-201ENST00000492268 272 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 MIR3198-2-201ENST00000577868 80 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 AC012433.1-201ENST00000588916 398 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 AC062037.2-201ENST00000610137 73 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 AC021506.2-201ENST00000612354 169 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 AC013791.1-201ENST00000616619 62 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 AL359851.1-201ENST00000569460 4997 ntBASIC1.68□□□□□ -2.14
CLDN2P57739 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CLDN2P57739 RNU6-1048P-201ENST00000364054 107 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 RNU6-1289P-201ENST00000384431 106 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 MTCO2P33-201ENST00000402100 465 ntBASIC1.67□□□□□ -2.14
CLDN2P57739 MIR1267-201ENST00000408723 78 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms