Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 MIR6129-201ENST00000616087 109 ntBASIC2.64□□□□□ -1.99
ITGA1P56199 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ITGA1P56199 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
ITGA1P56199 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ITGA1P56199 MIR26A1-201ENST00000362205 77 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 RNU6-461P-201ENST00000364195 107 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 RNU1-112P-201ENST00000364401 164 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 SNORD18B-201ENST00000365659 72 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 Y_RNA.486-201ENST00000384398 107 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 MIR561-201ENST00000385216 97 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 RNU6-220P-201ENST00000390919 107 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 RNU11-5P-201ENST00000391216 129 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 RNA5SP21-201ENST00000410917 96 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 RNU7-99P-201ENST00000516271 62 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 RNU6-667P-201ENST00000517186 102 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.63□□□□□ -1.99
ITGA1P56199 MIR3121-201ENST00000579680 77 ntBASIC2.63□□□□□ -1.99
ITGA1P56199 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
ITGA1P56199 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ITGA1P56199 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
ITGA1P56199 AL391516.1-201ENST00000554380 2449 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ITGA1P56199 RNU6-859P-201ENST00000362728 107 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 Y_RNA.114-201ENST00000363265 113 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 AL603914.1-201ENST00000401964 204 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 MIR1261-201ENST00000408659 82 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.62□□□□□ -1.99
ITGA1P56199 AC092427.1-202ENST00000430569 476 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 NDUFA4P2-201ENST00000489989 244 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 Y_RNA.690-201ENST00000516603 95 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 RNU6-365P-201ENST00000517113 106 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 RNU7-128P-201ENST00000517247 62 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 RNU2-60P-201ENST00000517290 128 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
ITGA1P56199 AC091178.2-201ENST00000584401 117 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 U6.95-201ENST00000636931 70 ntBASIC2.62□□□□□ -1.99
ITGA1P56199 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ITGA1P56199 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ITGA1P56199 RNA5SP432-201ENST00000362480 116 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 SNORA63.4-201ENST00000362763 126 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 Y_RNA.66-201ENST00000362862 102 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 SNORA40.5-201ENST00000391061 128 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 RNY4P18-201ENST00000391107 89 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 RNA5SP127-201ENST00000411051 133 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
ITGA1P56199 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.61□□□□□ -1.99
ITGA1P56199 TRBV12-1-201ENST00000479785 344 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 AC018868.1-201ENST00000491307 315 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 HMGN1P7-201ENST00000491722 313 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 SNORA18.4-201ENST00000516440 124 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 AC007751.1-201ENST00000529260 376 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 NDUFA5P6-201ENST00000542110 379 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 AC091544.4-201ENST00000555268 342 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 AC133485.4-201ENST00000561835 220 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 MTND5P34-201ENST00000568888 325 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 AC138907.4-201ENST00000570107 226 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 AL365205.2-201ENST00000594586 68 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
ITGA1P56199 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.61□□□□□ -1.99
ITGA1P56199 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.61□□□□□ -1.99
ITGA1P56199 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
ITGA1P56199 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ITGA1P56199 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.6□□□□□ -1.99
ITGA1P56199 Y_RNA.253-201ENST00000364562 112 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 MIR624-201ENST00000385217 97 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 AC003685.2-201ENST00000422795 395 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 AL353689.1-201ENST00000438895 199 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 AC233266.1-201ENST00000454518 96 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 YWHAEP4-201ENST00000505390 198 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 PDCD5P2-201ENST00000507570 312 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 RNU6-1041P-201ENST00000516254 102 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 RNU6-1061P-201ENST00000516530 99 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 RNU6-1291P-201ENST00000516591 104 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 AC004486.1-201ENST00000546846 233 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 AL353149.1-201ENST00000610667 244 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 AC242852.1-201ENST00000612151 96 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 AL359075.3-201ENST00000613288 217 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 AC244015.1-201ENST00000622301 99 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 MAPK10-266ENST00000641066 6555 ntBASIC2.6□□□□□ -1.99
ITGA1P56199 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.6□□□□□ -1.99
ITGA1P56199 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
ITGA1P56199 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.59□□□□□ -1.99
ITGA1P56199 AC018630.2-201ENST00000534866 2403 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 Y_RNA.52-201ENST00000362760 96 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
ITGA1P56199 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
ITGA1P56199 RNA5SP467-201ENST00000391274 118 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 SNRPGP10-201ENST00000432323 225 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 MRPS17P9-201ENST00000511924 393 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 Y_RNA.709-201ENST00000516952 92 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 CYCSP26-201ENST00000534107 320 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.59□□□□□ -1.99
ITGA1P56199 MIR6079-201ENST00000635807 62 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 MIR338-201ENST00000636369 67 ntBASIC2.59□□□□□ -1.99
ITGA1P56199 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ITGA1P56199 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms