Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 RNU11-5P-201ENST00000391216 129 ntBASIC1.42□□□□□ -2.18
PAX9P55771 MTCO2P33-201ENST00000402100 465 ntBASIC1.42□□□□□ -2.18
PAX9P55771 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
PAX9P55771 COX6CP10-201ENST00000416832 224 ntBASIC1.42□□□□□ -2.18
PAX9P55771 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.42□□□□□ -2.18
PAX9P55771 Z98949.2-201ENST00000440996 144 ntBASIC1.42□□□□□ -2.18
PAX9P55771 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.42□□□□□ -2.18
PAX9P55771 RNU7-34P-201ENST00000459394 64 ntBASIC1.42□□□□□ -2.18
PAX9P55771 OR9P1P-201ENST00000496431 281 ntBASIC1.42□□□□□ -2.18
PAX9P55771 RPS29P11-201ENST00000496507 171 ntBASIC1.42□□□□□ -2.18
PAX9P55771 MTND1P19-201ENST00000511780 315 ntBASIC1.42□□□□□ -2.18
PAX9P55771 RNU2-56P-201ENST00000516826 190 ntBASIC1.42□□□□□ -2.18
PAX9P55771 MIR4285-201ENST00000581001 85 ntBASIC1.42□□□□□ -2.18
PAX9P55771 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.42□□□□□ -2.18
PAX9P55771 snoU18.1-201ENST00000629629 71 ntBASIC1.42□□□□□ -2.18
PAX9P55771 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PAX9P55771 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.42□□□□□ -2.18
PAX9P55771 Y_RNA.14-201ENST00000362415 103 ntBASIC1.41□□□□□ -2.18
PAX9P55771 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
PAX9P55771 RNA5SP363-201ENST00000365072 115 ntBASIC1.41□□□□□ -2.18
PAX9P55771 RNU6-1289P-201ENST00000384431 106 ntBASIC1.41□□□□□ -2.18
PAX9P55771 MIR194-1-201ENST00000384892 85 ntBASIC1.41□□□□□ -2.18
PAX9P55771 MIR562-201ENST00000384894 95 ntBASIC1.41□□□□□ -2.18
PAX9P55771 AC019129.1-201ENST00000403786 261 ntBASIC1.41□□□□□ -2.18
PAX9P55771 RN7SKP200-201ENST00000410564 320 ntBASIC1.41□□□□□ -2.18
PAX9P55771 BTF3P11-201ENST00000426582 477 ntBASIC1.41□□□□□ -2.18
PAX9P55771 HMGN2P23-201ENST00000456759 269 ntBASIC1.41□□□□□ -2.18
PAX9P55771 RNU6-1132P-201ENST00000459214 107 ntBASIC1.41□□□□□ -2.18
PAX9P55771 AL049830.1-201ENST00000468034 425 ntBASIC1.41□□□□□ -2.18
PAX9P55771 AC005908.1-201ENST00000468701 347 ntBASIC1.41□□□□□ -2.18
PAX9P55771 Y_RNA.680-201ENST00000516441 93 ntBASIC1.41□□□□□ -2.18
PAX9P55771 MIR4643-201ENST00000577473 78 ntBASIC1.41□□□□□ -2.18
PAX9P55771 MIR3198-2-201ENST00000577868 80 ntBASIC1.41□□□□□ -2.18
PAX9P55771 SNORA77B-201ENST00000578179 125 ntBASIC1.41□□□□□ -2.18
PAX9P55771 MIR3149-201ENST00000584629 83 ntBASIC1.41□□□□□ -2.18
PAX9P55771 AC005357.1-201ENST00000588399 301 ntBASIC1.41□□□□□ -2.18
PAX9P55771 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.41□□□□□ -2.18
PAX9P55771 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.41□□□□□ -2.18
PAX9P55771 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
PAX9P55771 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
PAX9P55771 Y_RNA.265-201ENST00000364677 108 ntBASIC1.4□□□□□ -2.19
PAX9P55771 RNU6-950P-201ENST00000384651 107 ntBASIC1.4□□□□□ -2.19
PAX9P55771 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
PAX9P55771 AL603910.2-201ENST00000407268 136 ntBASIC1.4□□□□□ -2.19
PAX9P55771 SNORA36B-201ENST00000410438 131 ntBASIC1.4□□□□□ -2.19
PAX9P55771 Y_RNA.621-201ENST00000411065 96 ntBASIC1.4□□□□□ -2.19
PAX9P55771 JTBP1-201ENST00000441314 247 ntBASIC1.4□□□□□ -2.19
PAX9P55771 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.4□□□□□ -2.19
PAX9P55771 RNA5SP182-201ENST00000516064 82 ntBASIC1.4□□□□□ -2.19
PAX9P55771 RNU7-116P-201ENST00000516940 62 ntBASIC1.4□□□□□ -2.19
PAX9P55771 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.4□□□□□ -2.19
PAX9P55771 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.4□□□□□ -2.19
PAX9P55771 MIRLET7C-201ENST00000362160 84 ntBASIC1.39□□□□□ -2.19
PAX9P55771 RNU6-414P-201ENST00000363705 104 ntBASIC1.39□□□□□ -2.19
PAX9P55771 RNU6-899P-201ENST00000363947 107 ntBASIC1.39□□□□□ -2.19
PAX9P55771 Y_RNA.253-201ENST00000364562 112 ntBASIC1.39□□□□□ -2.19
PAX9P55771 RNU6-702P-201ENST00000364982 107 ntBASIC1.39□□□□□ -2.19
PAX9P55771 AL034345.1-201ENST00000407768 123 ntBASIC1.39□□□□□ -2.19
PAX9P55771 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.39□□□□□ -2.19
PAX9P55771 CALM2P4-201ENST00000430810 426 ntBASIC1.39□□□□□ -2.19
PAX9P55771 AC003989.2-201ENST00000440224 169 ntBASIC1.39□□□□□ -2.19
PAX9P55771 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.39□□□□□ -2.19
PAX9P55771 RPL23AP54-201ENST00000495129 419 ntBASIC1.39□□□□□ -2.19
PAX9P55771 RNU6-970P-201ENST00000516312 107 ntBASIC1.39□□□□□ -2.19
PAX9P55771 AC062037.2-201ENST00000610137 73 ntBASIC1.39□□□□□ -2.19
PAX9P55771 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.39□□□□□ -2.19
PAX9P55771 MIR8074-201ENST00000615081 81 ntBASIC1.39□□□□□ -2.19
PAX9P55771 AC013791.1-201ENST00000616619 62 ntBASIC1.39□□□□□ -2.19
PAX9P55771 AL591926.4-201ENST00000616895 298 ntBASIC1.39□□□□□ -2.19
PAX9P55771 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PAX9P55771 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.38□□□□□ -2.19
PAX9P55771 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PAX9P55771 MIR424-201ENST00000362227 98 ntBASIC1.38□□□□□ -2.19
PAX9P55771 Y_RNA.277-201ENST00000364754 102 ntBASIC1.38□□□□□ -2.19
PAX9P55771 Y_RNA.352-201ENST00000365439 102 ntBASIC1.38□□□□□ -2.19
PAX9P55771 RNU6-211P-201ENST00000384047 107 ntBASIC1.38□□□□□ -2.19
PAX9P55771 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
PAX9P55771 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.38□□□□□ -2.19
PAX9P55771 SNORD2.1-201ENST00000458762 69 ntBASIC1.38□□□□□ -2.19
PAX9P55771 SNORA44.1-201ENST00000517031 108 ntBASIC1.38□□□□□ -2.19
PAX9P55771 MIR5692C2-201ENST00000577959 77 ntBASIC1.38□□□□□ -2.19
PAX9P55771 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.38□□□□□ -2.19
PAX9P55771 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.38□□□□□ -2.19
PAX9P55771 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.37□□□□□ -2.19
PAX9P55771 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PAX9P55771 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.82-201ENST00000363000 102 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.92-201ENST00000363043 102 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.203-201ENST00000364106 102 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.235-201ENST00000364412 102 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.306-201ENST00000365015 102 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.307-201ENST00000365022 117 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.312-201ENST00000365089 102 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.322-201ENST00000365151 102 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.477-201ENST00000384352 108 ntBASIC1.37□□□□□ -2.19
PAX9P55771 RNU6-424P-201ENST00000384367 105 ntBASIC1.37□□□□□ -2.19
PAX9P55771 Y_RNA.539-201ENST00000384635 107 ntBASIC1.37□□□□□ -2.19
PAX9P55771 MIR9-3-201ENST00000385084 90 ntBASIC1.37□□□□□ -2.19
PAX9P55771 RNA5SP482-201ENST00000391269 118 ntBASIC1.37□□□□□ -2.19
PAX9P55771 U8.16-201ENST00000391279 133 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms