Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC027279.3-201ENST00000625055 122 ntBASIC0.72□□□□□ -2.29
CDH4P55283 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CDH4P55283 U8.5-201ENST00000364528 136 ntBASIC0.71□□□□□ -2.3
CDH4P55283 MIR891A-201ENST00000401237 79 ntBASIC0.71□□□□□ -2.3
CDH4P55283 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.71□□□□□ -2.3
CDH4P55283 RNU2-61P-201ENST00000411069 191 ntBASIC0.71□□□□□ -2.3
CDH4P55283 PIGPP3-201ENST00000425307 415 ntBASIC0.71□□□□□ -2.3
CDH4P55283 AC093019.1-201ENST00000443135 252 ntBASIC0.71□□□□□ -2.3
CDH4P55283 CYCTP-201ENST00000504253 315 ntBASIC0.71□□□□□ -2.3
CDH4P55283 AC114811.1-201ENST00000507207 168 ntBASIC0.71□□□□□ -2.3
CDH4P55283 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
CDH4P55283 RNU6-1012P-201ENST00000516606 109 ntBASIC0.71□□□□□ -2.3
CDH4P55283 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
CDH4P55283 AC133485.1-201ENST00000567176 124 ntBASIC0.71□□□□□ -2.3
CDH4P55283 AC138907.6-201ENST00000568401 126 ntBASIC0.71□□□□□ -2.3
CDH4P55283 MIR5690-201ENST00000583739 73 ntBASIC0.71□□□□□ -2.3
CDH4P55283 MIR4762-201ENST00000585261 75 ntBASIC0.71□□□□□ -2.3
CDH4P55283 AL591926.4-201ENST00000616895 298 ntBASIC0.71□□□□□ -2.3
CDH4P55283 Y_RNA.336-201ENST00000365307 109 ntBASIC0.7□□□□□ -2.3
CDH4P55283 RNU6-20P-201ENST00000384106 107 ntBASIC0.7□□□□□ -2.3
CDH4P55283 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
CDH4P55283 FCF1P4-201ENST00000448326 183 ntBASIC0.7□□□□□ -2.3
CDH4P55283 AC117454.1-201ENST00000491120 168 ntBASIC0.7□□□□□ -2.3
CDH4P55283 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.7□□□□□ -2.3
CDH4P55283 SNORA70.12-201ENST00000516084 153 ntBASIC0.7□□□□□ -2.3
CDH4P55283 RNU7-4P-201ENST00000516961 62 ntBASIC0.7□□□□□ -2.3
CDH4P55283 RNU6-264P-201ENST00000517134 104 ntBASIC0.7□□□□□ -2.3
CDH4P55283 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.7□□□□□ -2.3
CDH4P55283 MIR3192-201ENST00000584920 77 ntBASIC0.7□□□□□ -2.3
CDH4P55283 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
CDH4P55283 AL391903.3-201ENST00000612158 163 ntBASIC0.7□□□□□ -2.3
CDH4P55283 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.7□□□□□ -2.3
CDH4P55283 AC023934.1-201ENST00000574529 2389 ntBASIC0.69□□□□□ -2.3
CDH4P55283 SNORD68-201ENST00000363214 84 ntBASIC0.69□□□□□ -2.3
CDH4P55283 RNU6-626P-201ENST00000363354 107 ntBASIC0.69□□□□□ -2.3
CDH4P55283 Y_RNA.446-201ENST00000384178 104 ntBASIC0.69□□□□□ -2.3
CDH4P55283 RNU6-708P-201ENST00000384217 107 ntBASIC0.69□□□□□ -2.3
CDH4P55283 RNU6-163P-201ENST00000384396 106 ntBASIC0.69□□□□□ -2.3
CDH4P55283 MIR559-201ENST00000385188 96 ntBASIC0.69□□□□□ -2.3
CDH4P55283 RPS26P5-201ENST00000418544 335 ntBASIC0.69□□□□□ -2.3
CDH4P55283 RNU7-169P-201ENST00000459456 61 ntBASIC0.69□□□□□ -2.3
CDH4P55283 RNU6-436P-201ENST00000516171 114 ntBASIC0.69□□□□□ -2.3
CDH4P55283 AC144568.1-201ENST00000520139 137 ntBASIC0.69□□□□□ -2.3
CDH4P55283 MIR5000-201ENST00000577717 103 ntBASIC0.69□□□□□ -2.3
CDH4P55283 AC005176.2-201ENST00000596933 147 ntBASIC0.69□□□□□ -2.3
CDH4P55283 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
CDH4P55283 AC011476.5-201ENST00000615594 130 ntBASIC0.69□□□□□ -2.3
CDH4P55283 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.69□□□□□ -2.3
CDH4P55283 Y_RNA.330-201ENST00000365230 109 ntBASIC0.68□□□□□ -2.3
CDH4P55283 MIR1298-201ENST00000408783 112 ntBASIC0.68□□□□□ -2.3
CDH4P55283 AC138393.2-201ENST00000414742 246 ntBASIC0.68□□□□□ -2.3
CDH4P55283 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.68□□□□□ -2.3
CDH4P55283 FABP5P4-201ENST00000437203 171 ntBASIC0.68□□□□□ -2.3
CDH4P55283 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.68□□□□□ -2.3
CDH4P55283 CHEK2P4-201ENST00000450340 246 ntBASIC0.68□□□□□ -2.3
CDH4P55283 RNU6-559P-201ENST00000516151 98 ntBASIC0.68□□□□□ -2.3
CDH4P55283 SNORA20.3-201ENST00000516880 132 ntBASIC0.68□□□□□ -2.3
CDH4P55283 MIR4714-201ENST00000580728 77 ntBASIC0.68□□□□□ -2.3
CDH4P55283 AC006380.1-201ENST00000603598 186 ntBASIC0.68□□□□□ -2.3
CDH4P55283 AC113139.1-201ENST00000605049 239 ntBASIC0.68□□□□□ -2.3
CDH4P55283 AL355073.2-201ENST00000612106 557 ntBASIC0.68□□□□□ -2.3
CDH4P55283 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
CDH4P55283 Y_RNA.146-201ENST00000363549 102 ntBASIC0.67□□□□□ -2.3
CDH4P55283 Y_RNA.253-201ENST00000364562 112 ntBASIC0.67□□□□□ -2.3
CDH4P55283 SNORD116-29-201ENST00000384516 83 ntBASIC0.67□□□□□ -2.3
CDH4P55283 MIR522-201ENST00000385071 87 ntBASIC0.67□□□□□ -2.3
CDH4P55283 SNORD78.2-201ENST00000391076 69 ntBASIC0.67□□□□□ -2.3
CDH4P55283 Y_RNA.621-201ENST00000411065 96 ntBASIC0.67□□□□□ -2.3
CDH4P55283 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
CDH4P55283 RBMX2P4-201ENST00000441256 376 ntBASIC0.67□□□□□ -2.3
CDH4P55283 Y_RNA.653-201ENST00000459091 95 ntBASIC0.67□□□□□ -2.3
CDH4P55283 RNU6-277P-201ENST00000516272 106 ntBASIC0.67□□□□□ -2.3
CDH4P55283 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.67□□□□□ -2.3
CDH4P55283 AP003716.2-201ENST00000528260 108 ntBASIC0.67□□□□□ -2.3
CDH4P55283 MIR4659A-201ENST00000580269 81 ntBASIC0.67□□□□□ -2.3
CDH4P55283 AC104465.1-201ENST00000611365 139 ntBASIC0.67□□□□□ -2.3
CDH4P55283 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CDH4P55283 U2.1-201ENST00000618978 145 ntBASIC0.67□□□□□ -2.3
CDH4P55283 AL442644.1-201ENST00000454390 3105 ntBASIC0.67□□□□□ -2.3
CDH4P55283 AC117470.1-201ENST00000381974 330 ntBASIC0.66□□□□□ -2.3
CDH4P55283 Y_RNA.390-201ENST00000383932 102 ntBASIC0.66□□□□□ -2.3
CDH4P55283 RNU6-1105P-201ENST00000384774 107 ntBASIC0.66□□□□□ -2.3
CDH4P55283 MIR489-201ENST00000384923 84 ntBASIC0.66□□□□□ -2.3
CDH4P55283 MIR452-201ENST00000385020 85 ntBASIC0.66□□□□□ -2.3
CDH4P55283 Y_RNA.605-201ENST00000410577 105 ntBASIC0.66□□□□□ -2.3
CDH4P55283 AC096644.2-201ENST00000429278 159 ntBASIC0.66□□□□□ -2.3
CDH4P55283 PRDX4P1-201ENST00000507189 574 ntBASIC0.66□□□□□ -2.3
CDH4P55283 RNU6-155P-201ENST00000516347 100 ntBASIC0.66□□□□□ -2.3
CDH4P55283 RNU6-911P-201ENST00000516523 104 ntBASIC0.66□□□□□ -2.3
CDH4P55283 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
CDH4P55283 AC022441.3-201ENST00000605737 136 ntBASIC0.66□□□□□ -2.3
CDH4P55283 MTND4LP32-201ENST00000636111 270 ntBASIC0.66□□□□□ -2.3
CDH4P55283 U6.92-201ENST00000636464 89 ntBASIC0.66□□□□□ -2.3
CDH4P55283 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CDH4P55283 RNU6-490P-201ENST00000362985 107 ntBASIC0.65□□□□□ -2.31
CDH4P55283 Y_RNA.314-201ENST00000365114 102 ntBASIC0.65□□□□□ -2.31
CDH4P55283 Y_RNA.354-201ENST00000365448 111 ntBASIC0.65□□□□□ -2.31
CDH4P55283 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.65□□□□□ -2.31
CDH4P55283 AC098614.3-201ENST00000438957 440 ntBASIC0.65□□□□□ -2.31
CDH4P55283 RPS20P10-201ENST00000451209 253 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms