Protein–RNA interactions for Protein: P51955

NEK2, Serine/threonine-protein kinase Nek2, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2P51955 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
NEK2P51955 AC004965.1-201ENST00000413033 213 ntBASIC2.09□□□□□ -2.07
NEK2P51955 Y_RNA.650-201ENST00000459002 102 ntBASIC2.09□□□□□ -2.07
NEK2P51955 AC008834.1-201ENST00000511612 175 ntBASIC2.09□□□□□ -2.07
NEK2P51955 Y_RNA.777-201ENST00000516982 102 ntBASIC2.09□□□□□ -2.07
NEK2P51955 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
NEK2P51955 Y_RNA.771-201ENST00000598668 102 ntBASIC2.09□□□□□ -2.07
NEK2P51955 BX284668.6-201ENST00000606899 438 ntBASIC2.09□□□□□ -2.07
NEK2P51955 AL008718.3-201ENST00000610217 321 ntBASIC2.09□□□□□ -2.07
NEK2P51955 Y_RNA.789-201ENST00000622480 102 ntBASIC2.09□□□□□ -2.07
NEK2P51955 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NEK2P51955 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
NEK2P51955 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
NEK2P51955 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
NEK2P51955 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NEK2P51955 MIR367-201ENST00000362299 68 ntBASIC2.08□□□□□ -2.08
NEK2P51955 Y_RNA.416-201ENST00000384014 113 ntBASIC2.08□□□□□ -2.08
NEK2P51955 RNU6-211P-201ENST00000384047 107 ntBASIC2.08□□□□□ -2.08
NEK2P51955 RNU6-424P-201ENST00000384367 105 ntBASIC2.08□□□□□ -2.08
NEK2P51955 SNORA12.1-201ENST00000390873 148 ntBASIC2.08□□□□□ -2.08
NEK2P51955 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.08□□□□□ -2.08
NEK2P51955 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.08□□□□□ -2.08
NEK2P51955 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
NEK2P51955 SNORD3E-202ENST00000627253 216 ntBASIC2.08□□□□□ -2.08
NEK2P51955 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NEK2P51955 ICE2P2-201ENST00000483823 2787 ntBASIC2.07□□□□□ -2.08
NEK2P51955 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
NEK2P51955 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NEK2P51955 U8.5-201ENST00000364528 136 ntBASIC2.07□□□□□ -2.08
NEK2P51955 Y_RNA.478-201ENST00000384358 107 ntBASIC2.07□□□□□ -2.08
NEK2P51955 MIR194-1-201ENST00000384892 85 ntBASIC2.07□□□□□ -2.08
NEK2P51955 MIR660-201ENST00000385235 97 ntBASIC2.07□□□□□ -2.08
NEK2P51955 RNU6-131P-201ENST00000391144 107 ntBASIC2.07□□□□□ -2.08
NEK2P51955 MLLT10P1-201ENST00000418346 262 ntBASIC2.07□□□□□ -2.08
NEK2P51955 CALM2P4-201ENST00000430810 426 ntBASIC2.07□□□□□ -2.08
NEK2P51955 SNRPGP10-201ENST00000432323 225 ntBASIC2.07□□□□□ -2.08
NEK2P51955 Z98949.2-201ENST00000440996 144 ntBASIC2.07□□□□□ -2.08
NEK2P51955 CYCTP-201ENST00000504253 315 ntBASIC2.07□□□□□ -2.08
NEK2P51955 RNA5SP200-201ENST00000516360 103 ntBASIC2.07□□□□□ -2.08
NEK2P51955 RNA5SP168-201ENST00000516642 112 ntBASIC2.07□□□□□ -2.08
NEK2P51955 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
NEK2P51955 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
NEK2P51955 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.07□□□□□ -2.08
NEK2P51955 SNORA77B-201ENST00000578179 125 ntBASIC2.07□□□□□ -2.08
NEK2P51955 AC095038.3-201ENST00000634439 195 ntBASIC2.07□□□□□ -2.08
NEK2P51955 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
NEK2P51955 U8.2-201ENST00000363156 134 ntBASIC2.06□□□□□ -2.08
NEK2P51955 Y_RNA.277-201ENST00000364754 102 ntBASIC2.06□□□□□ -2.08
NEK2P51955 MIR513A1-201ENST00000385138 129 ntBASIC2.06□□□□□ -2.08
NEK2P51955 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
NEK2P51955 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
NEK2P51955 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.06□□□□□ -2.08
NEK2P51955 RNU6-1007P-201ENST00000516586 107 ntBASIC2.06□□□□□ -2.08
NEK2P51955 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
NEK2P51955 MIR4762-201ENST00000585261 75 ntBASIC2.06□□□□□ -2.08
NEK2P51955 MIR8063-201ENST00000621930 81 ntBASIC2.06□□□□□ -2.08
NEK2P51955 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NEK2P51955 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
NEK2P51955 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NEK2P51955 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NEK2P51955 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
NEK2P51955 RNU6-163P-201ENST00000384396 106 ntBASIC2.05□□□□□ -2.08
NEK2P51955 U8.16-201ENST00000391279 133 ntBASIC2.05□□□□□ -2.08
NEK2P51955 Y_RNA.618-201ENST00000410949 107 ntBASIC2.05□□□□□ -2.08
NEK2P51955 Z98742.3-201ENST00000418637 326 ntBASIC2.05□□□□□ -2.08
NEK2P51955 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
NEK2P51955 HSPE1P24-201ENST00000450782 238 ntBASIC2.05□□□□□ -2.08
NEK2P51955 AC023449.1-201ENST00000454464 154 ntBASIC2.05□□□□□ -2.08
NEK2P51955 SNORD2.1-201ENST00000458762 69 ntBASIC2.05□□□□□ -2.08
NEK2P51955 RNU7-12P-201ENST00000516030 62 ntBASIC2.05□□□□□ -2.08
NEK2P51955 MIR4724-201ENST00000579485 89 ntBASIC2.05□□□□□ -2.08
NEK2P51955 AC120024.3-201ENST00000603167 156 ntBASIC2.05□□□□□ -2.08
NEK2P51955 Y_RNA.802-201ENST00000614892 130 ntBASIC2.05□□□□□ -2.08
NEK2P51955 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
NEK2P51955 SNORD27-201ENST00000363981 72 ntBASIC2.04□□□□□ -2.08
NEK2P51955 Y_RNA.401-201ENST00000383965 117 ntBASIC2.04□□□□□ -2.08
NEK2P51955 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
NEK2P51955 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
NEK2P51955 AL356320.1-201ENST00000429616 163 ntBASIC2.04□□□□□ -2.08
NEK2P51955 AC005908.1-201ENST00000468701 347 ntBASIC2.04□□□□□ -2.08
NEK2P51955 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
NEK2P51955 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NEK2P51955 DEFB122-202ENST00000569013 197 ntBASIC2.04□□□□□ -2.08
NEK2P51955 AC087685.1-201ENST00000587507 141 ntBASIC2.04□□□□□ -2.08
NEK2P51955 AC006006.1-201ENST00000603082 144 ntBASIC2.04□□□□□ -2.08
NEK2P51955 AC027279.3-201ENST00000625055 122 ntBASIC2.04□□□□□ -2.08
NEK2P51955 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NEK2P51955 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NEK2P51955 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NEK2P51955 RNU6-1084P-201ENST00000362498 107 ntBASIC2.03□□□□□ -2.08
NEK2P51955 RNU6-1209P-201ENST00000363655 107 ntBASIC2.03□□□□□ -2.08
NEK2P51955 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
NEK2P51955 RNA5SP259-201ENST00000365541 109 ntBASIC2.03□□□□□ -2.08
NEK2P51955 SNORA70B-201ENST00000384210 135 ntBASIC2.03□□□□□ -2.08
NEK2P51955 Y_RNA.477-201ENST00000384352 108 ntBASIC2.03□□□□□ -2.08
NEK2P51955 MIR522-201ENST00000385071 87 ntBASIC2.03□□□□□ -2.08
NEK2P51955 MIR526A2-201ENST00000390198 65 ntBASIC2.03□□□□□ -2.08
NEK2P51955 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NEK2P51955 MIR934-201ENST00000401241 83 ntBASIC2.03□□□□□ -2.08
NEK2P51955 SNORA3.2-201ENST00000408221 125 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms