Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.79□□□□□ -1.96
CCNFP41002 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNFP41002 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNFP41002 MRPS17P9-201ENST00000511924 393 ntBASIC2.79□□□□□ -1.96
CCNFP41002 AC096725.1-201ENST00000514266 313 ntBASIC2.79□□□□□ -1.96
CCNFP41002 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.79□□□□□ -1.96
CCNFP41002 AL160236.1-201ENST00000556317 195 ntBASIC2.79□□□□□ -1.96
CCNFP41002 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.79□□□□□ -1.96
CCNFP41002 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNFP41002 MIR3670-2-201ENST00000582974 65 ntBASIC2.79□□□□□ -1.96
CCNFP41002 MIR3670-1-201ENST00000584160 65 ntBASIC2.79□□□□□ -1.96
CCNFP41002 MIR3670-3-201ENST00000584855 65 ntBASIC2.79□□□□□ -1.96
CCNFP41002 MIR3670-4-201ENST00000612260 65 ntBASIC2.79□□□□□ -1.96
CCNFP41002 AL591926.4-201ENST00000616895 298 ntBASIC2.79□□□□□ -1.96
CCNFP41002 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNFP41002 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNFP41002 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCNFP41002 Y_RNA.127-201ENST00000363386 109 ntBASIC2.78□□□□□ -1.96
CCNFP41002 RNU6-1138P-201ENST00000365359 106 ntBASIC2.78□□□□□ -1.96
CCNFP41002 SNORA44-201ENST00000384584 132 ntBASIC2.78□□□□□ -1.96
CCNFP41002 SNORD72-201ENST00000390994 80 ntBASIC2.78□□□□□ -1.96
CCNFP41002 MTATP6P29-201ENST00000415057 132 ntBASIC2.78□□□□□ -1.96
CCNFP41002 RNU7-94P-201ENST00000459576 63 ntBASIC2.78□□□□□ -1.96
CCNFP41002 RNU5E-3P-201ENST00000515913 68 ntBASIC2.78□□□□□ -1.96
CCNFP41002 SNORA18.4-201ENST00000516440 124 ntBASIC2.78□□□□□ -1.96
CCNFP41002 MIR3169-201ENST00000578032 83 ntBASIC2.78□□□□□ -1.96
CCNFP41002 AL359881.1-201ENST00000602916 267 ntBASIC2.78□□□□□ -1.96
CCNFP41002 U7.2-201ENST00000607576 63 ntBASIC2.78□□□□□ -1.96
CCNFP41002 AP001340.1-201ENST00000624405 217 ntBASIC2.78□□□□□ -1.96
CCNFP41002 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCNFP41002 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCNFP41002 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.77□□□□□ -1.97
CCNFP41002 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.77□□□□□ -1.97
CCNFP41002 SNORD116-14-201ENST00000383894 92 ntBASIC2.77□□□□□ -1.97
CCNFP41002 SNORD116-17-201ENST00000383929 92 ntBASIC2.77□□□□□ -1.97
CCNFP41002 SNORD116-15-201ENST00000384445 92 ntBASIC2.77□□□□□ -1.97
CCNFP41002 SNORD116-19-201ENST00000384729 92 ntBASIC2.77□□□□□ -1.97
CCNFP41002 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.77□□□□□ -1.97
CCNFP41002 AL139132.1-201ENST00000431587 344 ntBASIC2.77□□□□□ -1.97
CCNFP41002 RNU6-126P-201ENST00000516685 103 ntBASIC2.77□□□□□ -1.97
CCNFP41002 Y_RNA.714-201ENST00000517065 90 ntBASIC2.77□□□□□ -1.97
CCNFP41002 RNU1-104P-201ENST00000517280 175 ntBASIC2.77□□□□□ -1.97
CCNFP41002 AC024995.1-201ENST00000523014 93 ntBASIC2.77□□□□□ -1.97
CCNFP41002 AP002004.2-201ENST00000531656 154 ntBASIC2.77□□□□□ -1.97
CCNFP41002 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.77□□□□□ -1.97
CCNFP41002 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCNFP41002 U8.1-201ENST00000362843 134 ntBASIC2.76□□□□□ -1.97
CCNFP41002 Y_RNA.294-201ENST00000364916 102 ntBASIC2.76□□□□□ -1.97
CCNFP41002 SNORA11.4-201ENST00000408823 129 ntBASIC2.76□□□□□ -1.97
CCNFP41002 BX510359.4-201ENST00000423750 193 ntBASIC2.76□□□□□ -1.97
CCNFP41002 AC099677.2-201ENST00000436385 175 ntBASIC2.76□□□□□ -1.97
CCNFP41002 RPS26P45-201ENST00000471748 340 ntBASIC2.76□□□□□ -1.97
CCNFP41002 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.76□□□□□ -1.97
CCNFP41002 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.76□□□□□ -1.97
CCNFP41002 RNU4-57P-201ENST00000515980 135 ntBASIC2.76□□□□□ -1.97
CCNFP41002 RNU6-1270P-201ENST00000517128 108 ntBASIC2.76□□□□□ -1.97
CCNFP41002 ZNF861P-201ENST00000588126 639 ntBASIC2.76□□□□□ -1.97
CCNFP41002 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.76□□□□□ -1.97
CCNFP41002 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCNFP41002 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.76□□□□□ -1.97
CCNFP41002 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCNFP41002 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCNFP41002 RNU1-58P-201ENST00000362413 163 ntBASIC2.75□□□□□ -1.97
CCNFP41002 SNORD18B-201ENST00000365659 72 ntBASIC2.75□□□□□ -1.97
CCNFP41002 RNU6-80P-201ENST00000384195 107 ntBASIC2.75□□□□□ -1.97
CCNFP41002 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.75□□□□□ -1.97
CCNFP41002 Y_RNA.686-201ENST00000516548 134 ntBASIC2.75□□□□□ -1.97
CCNFP41002 RNU6-504P-201ENST00000516568 104 ntBASIC2.75□□□□□ -1.97
CCNFP41002 MIR3129-201ENST00000581095 76 ntBASIC2.75□□□□□ -1.97
CCNFP41002 MIR3124-201ENST00000582636 67 ntBASIC2.75□□□□□ -1.97
CCNFP41002 AC097639.2-201ENST00000603159 172 ntBASIC2.75□□□□□ -1.97
CCNFP41002 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.75□□□□□ -1.97
CCNFP41002 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.75□□□□□ -1.97
CCNFP41002 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.75□□□□□ -1.97
CCNFP41002 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCNFP41002 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCNFP41002 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCNFP41002 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCNFP41002 RNU6-1084P-201ENST00000362498 107 ntBASIC2.74□□□□□ -1.97
CCNFP41002 RNU6-235P-201ENST00000362644 107 ntBASIC2.74□□□□□ -1.97
CCNFP41002 AC245047.3-201ENST00000429428 127 ntBASIC2.74□□□□□ -1.97
CCNFP41002 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.74□□□□□ -1.97
CCNFP41002 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.74□□□□□ -1.97
CCNFP41002 Y_RNA.666-201ENST00000516187 112 ntBASIC2.74□□□□□ -1.97
CCNFP41002 AL358944.1-201ENST00000528537 144 ntBASIC2.74□□□□□ -1.97
CCNFP41002 Y_RNA.757-201ENST00000578934 114 ntBASIC2.74□□□□□ -1.97
CCNFP41002 AC131055.1-201ENST00000584626 316 ntBASIC2.74□□□□□ -1.97
CCNFP41002 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.74□□□□□ -1.97
CCNFP41002 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.74□□□□□ -1.97
CCNFP41002 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCNFP41002 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
CCNFP41002 Y_RNA.265-201ENST00000364677 108 ntBASIC2.73□□□□□ -1.97
CCNFP41002 MIR597-201ENST00000384968 97 ntBASIC2.73□□□□□ -1.97
CCNFP41002 RNA5SP109-201ENST00000391010 116 ntBASIC2.73□□□□□ -1.97
CCNFP41002 RNU11-3P-201ENST00000391111 133 ntBASIC2.73□□□□□ -1.97
CCNFP41002 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.73□□□□□ -1.97
CCNFP41002 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.73□□□□□ -1.97
CCNFP41002 AC008507.4-201ENST00000585464 127 ntBASIC2.73□□□□□ -1.97
CCNFP41002 MIR7106-201ENST00000612419 65 ntBASIC2.73□□□□□ -1.97
CCNFP41002 AC010297.1-201ENST00000623948 149 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms