Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MTND2P32-201ENST00000521584 1038 ntBASIC-1.38□□□□□ -2.63
SNCAP37840 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.38□□□□□ -2.63
SNCAP37840 uc_338.19-201ENST00000616808 99 ntBASIC-1.38□□□□□ -2.63
SNCAP37840 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.39□□□□□ -2.63
SNCAP37840 MIR635-201ENST00000384830 98 ntBASIC-1.39□□□□□ -2.63
SNCAP37840 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.39□□□□□ -2.63
SNCAP37840 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.39□□□□□ -2.63
SNCAP37840 RNU2-11P-201ENST00000459191 187 ntBASIC-1.39□□□□□ -2.63
SNCAP37840 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.39□□□□□ -2.63
SNCAP37840 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.39□□□□□ -2.63
SNCAP37840 SCARNA1-201ENST00000517138 166 ntBASIC-1.39□□□□□ -2.63
SNCAP37840 RNU6-86P-201ENST00000606534 107 ntBASIC-1.39□□□□□ -2.63
SNCAP37840 MIR8055-201ENST00000610739 97 ntBASIC-1.39□□□□□ -2.63
SNCAP37840 RNU6-324P-201ENST00000363957 106 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 RNU6-266P-201ENST00000364225 107 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 SNORA24-201ENST00000384096 131 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 SNORD38C-201ENST00000384381 69 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 MTND3P9-201ENST00000429526 346 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.4□□□□□ -2.63
SNCAP37840 RNU2-69P-201ENST00000516061 100 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 SNORD38.3-201ENST00000516599 73 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.4□□□□□ -2.63
SNCAP37840 AC090616.2-202ENST00000584248 222 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 MIR6851-201ENST00000617060 67 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 Z97988.1-201ENST00000637697 135 ntBASIC-1.4□□□□□ -2.63
SNCAP37840 AL596211.1-201ENST00000569873 2277 ntBASIC-1.41□□□□□ -2.63
SNCAP37840 AC236972.2-201ENST00000434979 310 ntBASIC-1.41□□□□□ -2.64
SNCAP37840 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.41□□□□□ -2.64
SNCAP37840 RNU6-274P-201ENST00000459566 107 ntBASIC-1.41□□□□□ -2.64
SNCAP37840 HSPE1P23-201ENST00000509838 286 ntBASIC-1.41□□□□□ -2.64
SNCAP37840 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.41□□□□□ -2.64
SNCAP37840 MTND1P35-201ENST00000526739 508 ntBASIC-1.41□□□□□ -2.64
SNCAP37840 AL355297.3-201ENST00000604082 446 ntBASIC-1.41□□□□□ -2.64
SNCAP37840 AC006386.1-201ENST00000619436 415 ntBASIC-1.41□□□□□ -2.64
SNCAP37840 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 SNORD114-15-201ENST00000364687 72 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
SNCAP37840 SNORD41.1-201ENST00000391000 69 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 RNU6-757P-201ENST00000410334 100 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 AC096949.1-201ENST00000412047 152 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 AC006210.1-201ENST00000424882 111 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.42□□□□□ -2.64
SNCAP37840 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.42□□□□□ -2.64
SNCAP37840 RNA5SP470-201ENST00000516463 106 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 RNU7-188P-201ENST00000517063 64 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 MTATP6P15-201ENST00000527233 835 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 MTCO3P23-201ENST00000561363 289 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 MIR378F-201ENST00000578143 78 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 MIR548AX-201ENST00000580117 73 ntBASIC-1.42□□□□□ -2.64
SNCAP37840 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.42□□□□□ -2.64
SNCAP37840 RNU6-403P-201ENST00000363163 104 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 SNORD12C-201ENST00000386307 89 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 RNU6-131P-201ENST00000391144 107 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 MTCYBP4-201ENST00000401524 249 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 UQCRBP2-201ENST00000447827 297 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 RNU7-161P-201ENST00000517289 62 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 MIR3684-201ENST00000579779 74 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.43□□□□□ -2.64
SNCAP37840 AL136370.1-201ENST00000608166 691 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 AL158209.2-201ENST00000619266 216 ntBASIC-1.43□□□□□ -2.64
SNCAP37840 RNU6-865P-201ENST00000364772 107 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 SNORA1.2-201ENST00000365189 134 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 SNORD115-44-201ENST00000365391 82 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 RNU6-393P-201ENST00000384475 107 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 RNU6-602P-201ENST00000411155 105 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.44□□□□□ -2.64
SNCAP37840 SNORA13-201ENST00000458790 133 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.44□□□□□ -2.64
SNCAP37840 GMFBP1-201ENST00000467831 427 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 RNU6-107P-201ENST00000516643 102 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 AP003072.1-201ENST00000531740 145 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 AC024405.2-202ENST00000532731 184 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.44□□□□□ -2.64
SNCAP37840 MIR4491-201ENST00000581087 68 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 MIR4324-201ENST00000584846 72 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 AP002371.2-201ENST00000624450 503 ntBASIC-1.44□□□□□ -2.64
SNCAP37840 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.44□□□□□ -2.64
SNCAP37840 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.44□□□□□ -2.64
SNCAP37840 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 MT-TY-201ENST00000387409 66 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 RNU6-913P-201ENST00000390913 95 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 RNA5SP118-201ENST00000410385 109 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.45□□□□□ -2.64
SNCAP37840 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.45□□□□□ -2.64
SNCAP37840 RN7SKP19-201ENST00000516016 252 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 RNU6-175P-201ENST00000516896 107 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 RNU6-334P-201ENST00000517072 102 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 RNU6-85P-201ENST00000605989 107 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 AC005828.6-201ENST00000606610 232 ntBASIC-1.45□□□□□ -2.64
SNCAP37840 AL049777.1-201ENST00000622740 518 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms