Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AL160236.1-201ENST00000556317 195 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.52□□□□□ -2.01
VAMP1P23763 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.52□□□□□ -2.01
VAMP1P23763 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAMP1P23763 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VAMP1P23763 SNORA25.7-201ENST00000364375 127 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 RNU6-203P-201ENST00000384038 104 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 Y_RNA.441-201ENST00000384123 112 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 PCNPP3-201ENST00000393579 471 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 RNU6-1135P-201ENST00000411083 103 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 RNU5E-9P-201ENST00000411164 104 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 AC004965.1-201ENST00000413033 213 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.51□□□□□ -2.01
VAMP1P23763 RPL23AP42-201ENST00000471152 471 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 RNU1-45P-201ENST00000517191 141 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.51□□□□□ -2.01
VAMP1P23763 MTND1P7-201ENST00000632801 297 ntBASIC2.51□□□□□ -2.01
VAMP1P23763 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VAMP1P23763 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VAMP1P23763 SNORD15B-201ENST00000384714 146 ntBASIC2.5□□□□□ -2.01
VAMP1P23763 MIR513A1-201ENST00000385138 129 ntBASIC2.5□□□□□ -2.01
VAMP1P23763 MIR548O-201ENST00000408583 114 ntBASIC2.5□□□□□ -2.01
VAMP1P23763 AC022254.1-201ENST00000567857 235 ntBASIC2.5□□□□□ -2.01
VAMP1P23763 AC008739.3-201ENST00000603262 127 ntBASIC2.5□□□□□ -2.01
VAMP1P23763 MIR8063-201ENST00000621930 81 ntBASIC2.5□□□□□ -2.01
VAMP1P23763 AC106754.2-201ENST00000623006 233 ntBASIC2.5□□□□□ -2.01
VAMP1P23763 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VAMP1P23763 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.5□□□□□ -2.01
VAMP1P23763 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VAMP1P23763 RNU6-268P-201ENST00000364174 107 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 RNU6-804P-201ENST00000384286 107 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 MIR200C-201ENST00000384980 68 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 MIR218-2-201ENST00000385006 110 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 MIR30A-201ENST00000385092 71 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 MIR516B2-201ENST00000385190 85 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 MIR136-201ENST00000385207 82 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 SNORA48.7-201ENST00000391302 135 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 AC015922.2-201ENST00000435593 184 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 snoU13.9-201ENST00000458927 103 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 AC107016.2-201ENST00000547968 190 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 MIR6844-201ENST00000637122 62 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 AC009093.8-201ENST00000641769 292 ntBASIC2.49□□□□□ -2.01
VAMP1P23763 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VAMP1P23763 AL590004.2-201ENST00000404787 371 ntBASIC2.48□□□□□ -2.01
VAMP1P23763 RNA5SP489-201ENST00000410986 109 ntBASIC2.48□□□□□ -2.01
VAMP1P23763 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.48□□□□□ -2.01
VAMP1P23763 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.48□□□□□ -2.01
VAMP1P23763 RNA5SP356-201ENST00000515972 94 ntBASIC2.48□□□□□ -2.01
VAMP1P23763 RNU6-322P-201ENST00000516010 103 ntBASIC2.48□□□□□ -2.01
VAMP1P23763 MIR514B-201ENST00000516774 80 ntBASIC2.48□□□□□ -2.01
VAMP1P23763 MIR3144-201ENST00000579460 79 ntBASIC2.48□□□□□ -2.01
VAMP1P23763 AC006441.5-201ENST00000612680 209 ntBASIC2.48□□□□□ -2.01
VAMP1P23763 WWP1P1-201ENST00000466609 2769 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VAMP1P23763 SNORA62.3-201ENST00000365110 153 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 SNORD24-201ENST00000383884 75 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 RNU6-1062P-201ENST00000383908 107 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 SNORA5A-201ENST00000384111 134 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 MIR554-201ENST00000384874 96 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 RNU6ATAC-201ENST00000408749 126 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.47□□□□□ -2.01
VAMP1P23763 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 DNAJC19P2-201ENST00000593340 302 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 AC007318.2-201ENST00000620999 243 ntBASIC2.47□□□□□ -2.01
VAMP1P23763 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VAMP1P23763 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
VAMP1P23763 RNU1-35P-201ENST00000362782 153 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 SNORA25.6-201ENST00000364121 118 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 RNU6-151P-201ENST00000364158 107 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 Y_RNA.393-201ENST00000383936 102 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 RNA5SP120-201ENST00000410900 112 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 RPS29P6-201ENST00000438196 145 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 SNORA18.4-201ENST00000516440 124 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 AC090142.3-201ENST00000519012 385 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 FAM106DP-201ENST00000586416 501 ntBASIC2.46□□□□□ -2.02
VAMP1P23763 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
VAMP1P23763 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VAMP1P23763 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VAMP1P23763 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
VAMP1P23763 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VAMP1P23763 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.45□□□□□ -2.02
VAMP1P23763 AC073325.2-201ENST00000339545 159 ntBASIC2.45□□□□□ -2.02
VAMP1P23763 SNORD61-201ENST00000384252 73 ntBASIC2.45□□□□□ -2.02
VAMP1P23763 MIR23B-201ENST00000384832 97 ntBASIC2.45□□□□□ -2.02
VAMP1P23763 AL356379.1-201ENST00000414105 126 ntBASIC2.45□□□□□ -2.02
VAMP1P23763 RNU7-25P-201ENST00000516544 62 ntBASIC2.45□□□□□ -2.02
VAMP1P23763 MIR3944-201ENST00000581277 108 ntBASIC2.45□□□□□ -2.02
VAMP1P23763 AC097639.2-201ENST00000603159 172 ntBASIC2.45□□□□□ -2.02
VAMP1P23763 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.45□□□□□ -2.02
VAMP1P23763 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VAMP1P23763 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VAMP1P23763 Y_RNA.398-201ENST00000383952 99 ntBASIC2.44□□□□□ -2.02
VAMP1P23763 MIR512-1-201ENST00000384913 84 ntBASIC2.44□□□□□ -2.02
VAMP1P23763 RNU6-394P-201ENST00000410735 107 ntBASIC2.44□□□□□ -2.02
VAMP1P23763 HSPE1P24-201ENST00000450782 238 ntBASIC2.44□□□□□ -2.02
VAMP1P23763 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.44□□□□□ -2.02
VAMP1P23763 MIR6075-201ENST00000620782 95 ntBASIC2.44□□□□□ -2.02
VAMP1P23763 AC095038.3-201ENST00000634439 195 ntBASIC2.44□□□□□ -2.02
VAMP1P23763 AC021753.1-201ENST00000635724 168 ntBASIC2.44□□□□□ -2.02
VAMP1P23763 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms