Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
CDH3P22223 MIR302D-201ENST00000362275 68 ntBASIC1.45□□□□□ -2.18
CDH3P22223 Y_RNA.152-201ENST00000363578 100 ntBASIC1.45□□□□□ -2.18
CDH3P22223 Y_RNA.338-201ENST00000365320 114 ntBASIC1.45□□□□□ -2.18
CDH3P22223 Y_RNA.341-201ENST00000365341 102 ntBASIC1.45□□□□□ -2.18
CDH3P22223 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
CDH3P22223 MIR562-201ENST00000384894 95 ntBASIC1.45□□□□□ -2.18
CDH3P22223 RPL30P13-201ENST00000418873 348 ntBASIC1.45□□□□□ -2.18
CDH3P22223 AC233266.1-201ENST00000454518 96 ntBASIC1.45□□□□□ -2.18
CDH3P22223 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH3P22223 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
CDH3P22223 RNU1-92P-201ENST00000517017 135 ntBASIC1.45□□□□□ -2.18
CDH3P22223 Y_RNA.720-201ENST00000517166 92 ntBASIC1.45□□□□□ -2.18
CDH3P22223 AP002004.2-201ENST00000531656 154 ntBASIC1.45□□□□□ -2.18
CDH3P22223 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
CDH3P22223 AC242852.1-201ENST00000612151 96 ntBASIC1.45□□□□□ -2.18
CDH3P22223 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
CDH3P22223 AC244015.1-201ENST00000622301 99 ntBASIC1.45□□□□□ -2.18
CDH3P22223 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDH3P22223 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CDH3P22223 Y_RNA.136-201ENST00000363444 102 ntBASIC1.44□□□□□ -2.18
CDH3P22223 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
CDH3P22223 Y_RNA.456-201ENST00000384232 111 ntBASIC1.44□□□□□ -2.18
CDH3P22223 Y_RNA.541-201ENST00000384640 113 ntBASIC1.44□□□□□ -2.18
CDH3P22223 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
CDH3P22223 AL034345.1-201ENST00000407768 123 ntBASIC1.44□□□□□ -2.18
CDH3P22223 AC004965.1-201ENST00000413033 213 ntBASIC1.44□□□□□ -2.18
CDH3P22223 AL731563.1-201ENST00000442202 214 ntBASIC1.44□□□□□ -2.18
CDH3P22223 MTATP8P1-201ENST00000467115 207 ntBASIC1.44□□□□□ -2.18
CDH3P22223 OR9P1P-201ENST00000496431 281 ntBASIC1.44□□□□□ -2.18
CDH3P22223 AC108729.3-201ENST00000513484 108 ntBASIC1.44□□□□□ -2.18
CDH3P22223 RNU2-56P-201ENST00000516826 190 ntBASIC1.44□□□□□ -2.18
CDH3P22223 AL358944.1-201ENST00000528537 144 ntBASIC1.44□□□□□ -2.18
CDH3P22223 AP003733.2-201ENST00000529409 171 ntBASIC1.44□□□□□ -2.18
CDH3P22223 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
CDH3P22223 AC015688.6-201ENST00000577737 104 ntBASIC1.44□□□□□ -2.18
CDH3P22223 MIR4719-201ENST00000585233 84 ntBASIC1.44□□□□□ -2.18
CDH3P22223 AC005972.2-201ENST00000604690 348 ntBASIC1.44□□□□□ -2.18
CDH3P22223 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.44□□□□□ -2.18
CDH3P22223 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.44□□□□□ -2.18
CDH3P22223 RNU6-290P-201ENST00000365212 101 ntBASIC1.43□□□□□ -2.18
CDH3P22223 RNU6-738P-201ENST00000384531 106 ntBASIC1.43□□□□□ -2.18
CDH3P22223 AC024067.1-201ENST00000426199 223 ntBASIC1.43□□□□□ -2.18
CDH3P22223 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
CDH3P22223 MTND5P22-201ENST00000458380 195 ntBASIC1.43□□□□□ -2.18
CDH3P22223 RNU6-1143P-201ENST00000516125 104 ntBASIC1.43□□□□□ -2.18
CDH3P22223 RNU6-191P-201ENST00000516295 94 ntBASIC1.43□□□□□ -2.18
CDH3P22223 AC011604.1-201ENST00000545978 196 ntBASIC1.43□□□□□ -2.18
CDH3P22223 AL162424.1-201ENST00000602325 221 ntBASIC1.43□□□□□ -2.18
CDH3P22223 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.43□□□□□ -2.18
CDH3P22223 MIR337-201ENST00000362281 93 ntBASIC1.42□□□□□ -2.18
CDH3P22223 RNU6-1123P-201ENST00000362347 106 ntBASIC1.42□□□□□ -2.18
CDH3P22223 RNU4-41P-201ENST00000364426 143 ntBASIC1.42□□□□□ -2.18
CDH3P22223 Y_RNA.265-201ENST00000364677 108 ntBASIC1.42□□□□□ -2.18
CDH3P22223 RNU6-1080P-201ENST00000383982 107 ntBASIC1.42□□□□□ -2.18
CDH3P22223 Y_RNA.569-201ENST00000384749 103 ntBASIC1.42□□□□□ -2.18
CDH3P22223 RNU6-1109P-201ENST00000391187 107 ntBASIC1.42□□□□□ -2.18
CDH3P22223 MIR548F4-201ENST00000408515 105 ntBASIC1.42□□□□□ -2.18
CDH3P22223 AP1B1P2-201ENST00000416196 106 ntBASIC1.42□□□□□ -2.18
CDH3P22223 MTCO1P5-201ENST00000433573 344 ntBASIC1.42□□□□□ -2.18
CDH3P22223 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH3P22223 Z98949.2-201ENST00000440996 144 ntBASIC1.42□□□□□ -2.18
CDH3P22223 DYNLT3P2-201ENST00000442517 295 ntBASIC1.42□□□□□ -2.18
CDH3P22223 PGBD4P5-201ENST00000445958 426 ntBASIC1.42□□□□□ -2.18
CDH3P22223 RNU7-95P-201ENST00000459222 64 ntBASIC1.42□□□□□ -2.18
CDH3P22223 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
CDH3P22223 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH3P22223 AL160236.1-201ENST00000556317 195 ntBASIC1.42□□□□□ -2.18
CDH3P22223 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH3P22223 SNORA28-201ENST00000606769 126 ntBASIC1.42□□□□□ -2.18
CDH3P22223 AC073349.3-201ENST00000617616 186 ntBASIC1.42□□□□□ -2.18
CDH3P22223 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CDH3P22223 AC068647.2-201ENST00000637380 353 ntBASIC1.42□□□□□ -2.18
CDH3P22223 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
CDH3P22223 ZNF209P-201ENST00000593450 2304 ntBASIC1.41□□□□□ -2.18
CDH3P22223 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDH3P22223 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
CDH3P22223 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CDH3P22223 Y_RNA.16-201ENST00000362421 102 ntBASIC1.41□□□□□ -2.18
CDH3P22223 Y_RNA.84-201ENST00000363011 104 ntBASIC1.41□□□□□ -2.18
CDH3P22223 RNU6-801P-201ENST00000364087 105 ntBASIC1.41□□□□□ -2.18
CDH3P22223 RNU6-1323P-201ENST00000384025 107 ntBASIC1.41□□□□□ -2.18
CDH3P22223 RNU6-424P-201ENST00000384367 105 ntBASIC1.41□□□□□ -2.18
CDH3P22223 Y_RNA.512-201ENST00000384518 102 ntBASIC1.41□□□□□ -2.18
CDH3P22223 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.41□□□□□ -2.18
CDH3P22223 RNU2-14P-201ENST00000411053 191 ntBASIC1.41□□□□□ -2.18
CDH3P22223 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH3P22223 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH3P22223 CALM2P4-201ENST00000430810 426 ntBASIC1.41□□□□□ -2.18
CDH3P22223 AC009474.2-201ENST00000451383 136 ntBASIC1.41□□□□□ -2.18
CDH3P22223 AL049830.1-201ENST00000468034 425 ntBASIC1.41□□□□□ -2.18
CDH3P22223 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH3P22223 SCARNA15.1-201ENST00000516384 125 ntBASIC1.41□□□□□ -2.18
CDH3P22223 RNU7-28P-201ENST00000516759 62 ntBASIC1.41□□□□□ -2.18
CDH3P22223 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH3P22223 AL161670.1-201ENST00000554348 137 ntBASIC1.41□□□□□ -2.18
CDH3P22223 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
CDH3P22223 AL513423.1-201ENST00000621695 132 ntBASIC1.41□□□□□ -2.18
CDH3P22223 MIR8063-201ENST00000621930 81 ntBASIC1.41□□□□□ -2.18
CDH3P22223 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms