Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 MIR8074-201ENST00000615081 81 ntBASIC1.89□□□□□ -2.11
RXRAP19793 MIR8054-201ENST00000620877 86 ntBASIC1.89□□□□□ -2.11
RXRAP19793 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RXRAP19793 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.88□□□□□ -2.11
RXRAP19793 SNORD27-201ENST00000363981 72 ntBASIC1.88□□□□□ -2.11
RXRAP19793 RNA5SP99-201ENST00000364020 114 ntBASIC1.88□□□□□ -2.11
RXRAP19793 Y_RNA.352-201ENST00000365439 102 ntBASIC1.88□□□□□ -2.11
RXRAP19793 Y_RNA.552-201ENST00000384665 112 ntBASIC1.88□□□□□ -2.11
RXRAP19793 RNU6-376P-201ENST00000384731 106 ntBASIC1.88□□□□□ -2.11
RXRAP19793 Y_RNA.569-201ENST00000384749 103 ntBASIC1.88□□□□□ -2.11
RXRAP19793 MIR520G-201ENST00000385064 90 ntBASIC1.88□□□□□ -2.11
RXRAP19793 SNORA53-201ENST00000391141 249 ntBASIC1.88□□□□□ -2.11
RXRAP19793 AL603910.2-201ENST00000407268 136 ntBASIC1.88□□□□□ -2.11
RXRAP19793 MIR1323-201ENST00000408090 73 ntBASIC1.88□□□□□ -2.11
RXRAP19793 AL162725.1-201ENST00000435405 301 ntBASIC1.88□□□□□ -2.11
RXRAP19793 JTBP1-201ENST00000441314 247 ntBASIC1.88□□□□□ -2.11
RXRAP19793 SERF1AP1-201ENST00000514575 187 ntBASIC1.88□□□□□ -2.11
RXRAP19793 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
RXRAP19793 MIR3683-201ENST00000580847 82 ntBASIC1.88□□□□□ -2.11
RXRAP19793 U2.14-201ENST00000615943 113 ntBASIC1.88□□□□□ -2.11
RXRAP19793 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RXRAP19793 Y_RNA.20-201ENST00000362479 113 ntBASIC1.87□□□□□ -2.11
RXRAP19793 Y_RNA.54-201ENST00000362766 105 ntBASIC1.87□□□□□ -2.11
RXRAP19793 RNU6-414P-201ENST00000363705 104 ntBASIC1.87□□□□□ -2.11
RXRAP19793 Y_RNA.257-201ENST00000364596 102 ntBASIC1.87□□□□□ -2.11
RXRAP19793 RNU6-326P-201ENST00000365480 107 ntBASIC1.87□□□□□ -2.11
RXRAP19793 RNU6-439P-201ENST00000384188 106 ntBASIC1.87□□□□□ -2.11
RXRAP19793 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
RXRAP19793 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RXRAP19793 RNU6-440P-201ENST00000390882 105 ntBASIC1.87□□□□□ -2.11
RXRAP19793 RNU6-907P-201ENST00000390924 102 ntBASIC1.87□□□□□ -2.11
RXRAP19793 RN7SKP200-201ENST00000410564 320 ntBASIC1.87□□□□□ -2.11
RXRAP19793 AL161935.2-201ENST00000414627 60 ntBASIC1.87□□□□□ -2.11
RXRAP19793 COX6CP10-201ENST00000416832 224 ntBASIC1.87□□□□□ -2.11
RXRAP19793 POLR2KP2-201ENST00000438155 177 ntBASIC1.87□□□□□ -2.11
RXRAP19793 HSPE1P21-201ENST00000438283 308 ntBASIC1.87□□□□□ -2.11
RXRAP19793 AC091021.1-201ENST00000468051 388 ntBASIC1.87□□□□□ -2.11
RXRAP19793 RNU2-31P-201ENST00000516954 155 ntBASIC1.87□□□□□ -2.11
RXRAP19793 AL358944.1-201ENST00000528537 144 ntBASIC1.87□□□□□ -2.11
RXRAP19793 AC015720.1-201ENST00000565251 277 ntBASIC1.87□□□□□ -2.11
RXRAP19793 MIR4709-201ENST00000577272 72 ntBASIC1.87□□□□□ -2.11
RXRAP19793 SNORA77B-201ENST00000578179 125 ntBASIC1.87□□□□□ -2.11
RXRAP19793 AC037487.3-201ENST00000606668 112 ntBASIC1.87□□□□□ -2.11
RXRAP19793 AL353997.5-201ENST00000618886 171 ntBASIC1.87□□□□□ -2.11
RXRAP19793 SNORA25.1-201ENST00000362326 128 ntBASIC1.86□□□□□ -2.11
RXRAP19793 Y_RNA.383-201ENST00000383855 97 ntBASIC1.86□□□□□ -2.11
RXRAP19793 RNU6-514P-201ENST00000384208 107 ntBASIC1.86□□□□□ -2.11
RXRAP19793 MIR194-1-201ENST00000384892 85 ntBASIC1.86□□□□□ -2.11
RXRAP19793 SNORA17.3-201ENST00000391159 129 ntBASIC1.86□□□□□ -2.11
RXRAP19793 AC024067.1-201ENST00000426199 223 ntBASIC1.86□□□□□ -2.11
RXRAP19793 RNU6-111P-201ENST00000517179 105 ntBASIC1.86□□□□□ -2.11
RXRAP19793 AL162424.1-201ENST00000602325 221 ntBASIC1.86□□□□□ -2.11
RXRAP19793 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.85□□□□□ -2.11
RXRAP19793 Y_RNA.277-201ENST00000364754 102 ntBASIC1.85□□□□□ -2.11
RXRAP19793 Y_RNA.368-201ENST00000365547 113 ntBASIC1.85□□□□□ -2.11
RXRAP19793 Y_RNA.418-201ENST00000384029 102 ntBASIC1.85□□□□□ -2.11
RXRAP19793 SNORD116-13-201ENST00000384408 92 ntBASIC1.85□□□□□ -2.11
RXRAP19793 Y_RNA.539-201ENST00000384635 107 ntBASIC1.85□□□□□ -2.11
RXRAP19793 RNU6-1031P-201ENST00000384773 107 ntBASIC1.85□□□□□ -2.11
RXRAP19793 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.85□□□□□ -2.11
RXRAP19793 RNA5SP511-201ENST00000410487 115 ntBASIC1.85□□□□□ -2.11
RXRAP19793 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.85□□□□□ -2.11
RXRAP19793 AC099513.1-201ENST00000490423 301 ntBASIC1.85□□□□□ -2.11
RXRAP19793 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.85□□□□□ -2.11
RXRAP19793 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
RXRAP19793 RNU6-63P-201ENST00000516690 95 ntBASIC1.85□□□□□ -2.11
RXRAP19793 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.85□□□□□ -2.11
RXRAP19793 DEFB117-201ENST00000602356 141 ntBASIC1.85□□□□□ -2.11
RXRAP19793 AL929325.1-201ENST00000603096 117 ntBASIC1.85□□□□□ -2.11
RXRAP19793 AC004832.4-201ENST00000608952 331 ntBASIC1.85□□□□□ -2.11
RXRAP19793 AC141273.2-201ENST00000618989 130 ntBASIC1.85□□□□□ -2.11
RXRAP19793 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.85□□□□□ -2.11
RXRAP19793 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RXRAP19793 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RXRAP19793 Y_RNA.44-201ENST00000362676 108 ntBASIC1.84□□□□□ -2.11
RXRAP19793 Y_RNA.136-201ENST00000363444 102 ntBASIC1.84□□□□□ -2.11
RXRAP19793 Y_RNA.310-201ENST00000365063 113 ntBASIC1.84□□□□□ -2.11
RXRAP19793 RNU6-338P-201ENST00000383888 105 ntBASIC1.84□□□□□ -2.11
RXRAP19793 Y_RNA.456-201ENST00000384232 111 ntBASIC1.84□□□□□ -2.11
RXRAP19793 Y_RNA.515-201ENST00000384535 112 ntBASIC1.84□□□□□ -2.11
RXRAP19793 SNORA12.1-201ENST00000390873 148 ntBASIC1.84□□□□□ -2.11
RXRAP19793 MIR1267-201ENST00000408723 78 ntBASIC1.84□□□□□ -2.11
RXRAP19793 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.84□□□□□ -2.11
RXRAP19793 MTCO1P5-201ENST00000433573 344 ntBASIC1.84□□□□□ -2.11
RXRAP19793 AC091959.1-201ENST00000495857 238 ntBASIC1.84□□□□□ -2.11
RXRAP19793 AP002004.2-201ENST00000531656 154 ntBASIC1.84□□□□□ -2.11
RXRAP19793 MIR4255-201ENST00000579351 72 ntBASIC1.84□□□□□ -2.11
RXRAP19793 BX284668.6-201ENST00000606899 438 ntBASIC1.84□□□□□ -2.11
RXRAP19793 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.84□□□□□ -2.11
RXRAP19793 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RXRAP19793 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RXRAP19793 Y_RNA.172-201ENST00000363765 102 ntBASIC1.83□□□□□ -2.12
RXRAP19793 RPS20P10-201ENST00000451209 253 ntBASIC1.83□□□□□ -2.12
RXRAP19793 RNU7-28P-201ENST00000516759 62 ntBASIC1.83□□□□□ -2.12
RXRAP19793 MIR3145-201ENST00000580727 82 ntBASIC1.83□□□□□ -2.12
RXRAP19793 MIR4303-201ENST00000581299 66 ntBASIC1.83□□□□□ -2.12
RXRAP19793 AL645939.4-201ENST00000604495 135 ntBASIC1.83□□□□□ -2.12
RXRAP19793 SNORA28-201ENST00000606769 126 ntBASIC1.83□□□□□ -2.12
RXRAP19793 Y_RNA.65-201ENST00000362846 100 ntBASIC1.82□□□□□ -2.12
RXRAP19793 RNU4-80P-201ENST00000363200 141 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms