Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC096644.4-201ENST00000563417 2912 ntBASIC3.13□□□□□ -1.91
LIG1P18858 RNU1-23P-201ENST00000363361 144 ntBASIC3.13□□□□□ -1.91
LIG1P18858 RNU6-743P-201ENST00000364151 106 ntBASIC3.13□□□□□ -1.91
LIG1P18858 RNU6-309P-201ENST00000364573 106 ntBASIC3.13□□□□□ -1.91
LIG1P18858 SNORA22-201ENST00000383907 134 ntBASIC3.13□□□□□ -1.91
LIG1P18858 RNU1-138P-201ENST00000384093 164 ntBASIC3.13□□□□□ -1.91
LIG1P18858 MIR524-201ENST00000385242 87 ntBASIC3.13□□□□□ -1.91
LIG1P18858 RNU11-5P-201ENST00000391216 129 ntBASIC3.13□□□□□ -1.91
LIG1P18858 AC063976.4-201ENST00000421971 163 ntBASIC3.13□□□□□ -1.91
LIG1P18858 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
LIG1P18858 AC018634.1-201ENST00000437554 401 ntBASIC3.13□□□□□ -1.91
LIG1P18858 AC107083.1-201ENST00000439643 279 ntBASIC3.13□□□□□ -1.91
LIG1P18858 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.13□□□□□ -1.91
LIG1P18858 RPS26P45-201ENST00000471748 340 ntBASIC3.13□□□□□ -1.91
LIG1P18858 RNU6-1061P-201ENST00000516530 99 ntBASIC3.13□□□□□ -1.91
LIG1P18858 RNA5SP367-201ENST00000516557 118 ntBASIC3.13□□□□□ -1.91
LIG1P18858 AC091178.2-201ENST00000584401 117 ntBASIC3.13□□□□□ -1.91
LIG1P18858 AC108081.1-201ENST00000604358 221 ntBASIC3.13□□□□□ -1.91
LIG1P18858 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LIG1P18858 MIR26A1-201ENST00000362205 77 ntBASIC3.12□□□□□ -1.91
LIG1P18858 Y_RNA.52-201ENST00000362760 96 ntBASIC3.12□□□□□ -1.91
LIG1P18858 RNU1-52P-201ENST00000384190 164 ntBASIC3.12□□□□□ -1.91
LIG1P18858 RNU6-851P-201ENST00000384565 107 ntBASIC3.12□□□□□ -1.91
LIG1P18858 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.12□□□□□ -1.91
LIG1P18858 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.12□□□□□ -1.91
LIG1P18858 NDUFA4P2-201ENST00000489989 244 ntBASIC3.12□□□□□ -1.91
LIG1P18858 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
LIG1P18858 RNU6-991P-201ENST00000516168 107 ntBASIC3.12□□□□□ -1.91
LIG1P18858 SNORD33.1-201ENST00000516213 88 ntBASIC3.12□□□□□ -1.91
LIG1P18858 RNU7-99P-201ENST00000516271 62 ntBASIC3.12□□□□□ -1.91
LIG1P18858 AC007751.1-201ENST00000529260 376 ntBASIC3.12□□□□□ -1.91
LIG1P18858 GTF3AP2-201ENST00000557014 266 ntBASIC3.12□□□□□ -1.91
LIG1P18858 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.12□□□□□ -1.91
LIG1P18858 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.12□□□□□ -1.91
LIG1P18858 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIG1P18858 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.12□□□□□ -1.91
LIG1P18858 MIRLET7F2-201ENST00000385277 83 ntBASIC3.11□□□□□ -1.91
LIG1P18858 HMGN2P34-201ENST00000437647 269 ntBASIC3.11□□□□□ -1.91
LIG1P18858 HMGN1P7-201ENST00000491722 313 ntBASIC3.11□□□□□ -1.91
LIG1P18858 RN7SKP132-201ENST00000516001 208 ntBASIC3.11□□□□□ -1.91
LIG1P18858 RNU6-504P-201ENST00000516568 104 ntBASIC3.11□□□□□ -1.91
LIG1P18858 MIR4446-201ENST00000578505 67 ntBASIC3.11□□□□□ -1.91
LIG1P18858 AC007229.1-201ENST00000590455 412 ntBASIC3.11□□□□□ -1.91
LIG1P18858 AC073413.2-201ENST00000604332 360 ntBASIC3.11□□□□□ -1.91
LIG1P18858 AL049779.4-201ENST00000604500 156 ntBASIC3.11□□□□□ -1.91
LIG1P18858 SCARNA15.3-201ENST00000626315 122 ntBASIC3.11□□□□□ -1.91
LIG1P18858 SCARNA4.1-201ENST00000628597 123 ntBASIC3.11□□□□□ -1.91
LIG1P18858 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.1□□□□□ -1.91
LIG1P18858 RNU6-1298P-201ENST00000362456 101 ntBASIC3.1□□□□□ -1.91
LIG1P18858 snoU2-30.2-201ENST00000362805 70 ntBASIC3.1□□□□□ -1.91
LIG1P18858 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LIG1P18858 RPS15AP28-201ENST00000435088 386 ntBASIC3.1□□□□□ -1.91
LIG1P18858 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.1□□□□□ -1.91
LIG1P18858 AC011406.1-201ENST00000512440 370 ntBASIC3.1□□□□□ -1.91
LIG1P18858 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.1□□□□□ -1.91
LIG1P18858 RNU7-128P-201ENST00000517247 62 ntBASIC3.1□□□□□ -1.91
LIG1P18858 MIR3613-201ENST00000579844 87 ntBASIC3.1□□□□□ -1.91
LIG1P18858 MTND5P32-201ENST00000560711 1802 ntBASIC3.09□□□□□ -1.91
LIG1P18858 RNU6-508P-201ENST00000363231 103 ntBASIC3.09□□□□□ -1.91
LIG1P18858 RNU6-1186P-201ENST00000410429 97 ntBASIC3.09□□□□□ -1.91
LIG1P18858 AC105272.1-201ENST00000438604 198 ntBASIC3.09□□□□□ -1.91
LIG1P18858 MTATP6P21-201ENST00000440681 189 ntBASIC3.09□□□□□ -1.91
LIG1P18858 RN7SKP19-201ENST00000516016 252 ntBASIC3.09□□□□□ -1.91
LIG1P18858 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.09□□□□□ -1.91
LIG1P18858 AL358944.1-201ENST00000528537 144 ntBASIC3.09□□□□□ -1.91
LIG1P18858 AC079600.2-201ENST00000550076 130 ntBASIC3.09□□□□□ -1.91
LIG1P18858 AL136360.1-201ENST00000503377 1900 ntBASIC3.09□□□□□ -1.92
LIG1P18858 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LIG1P18858 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.09□□□□□ -1.92
LIG1P18858 Y_RNA.346-201ENST00000365385 112 ntBASIC3.08□□□□□ -1.92
LIG1P18858 RNU6-1292P-201ENST00000383856 107 ntBASIC3.08□□□□□ -1.92
LIG1P18858 MIR561-201ENST00000385216 97 ntBASIC3.08□□□□□ -1.92
LIG1P18858 MIR548A3-201ENST00000385297 97 ntBASIC3.08□□□□□ -1.92
LIG1P18858 RNU2-63P-201ENST00000410792 194 ntBASIC3.08□□□□□ -1.92
LIG1P18858 AL353689.1-201ENST00000438895 199 ntBASIC3.08□□□□□ -1.92
LIG1P18858 MRPS17P9-201ENST00000511924 393 ntBASIC3.08□□□□□ -1.92
LIG1P18858 RNU6-781P-201ENST00000516377 101 ntBASIC3.08□□□□□ -1.92
LIG1P18858 AL022345.2-201ENST00000606307 135 ntBASIC3.08□□□□□ -1.92
LIG1P18858 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.08□□□□□ -1.92
LIG1P18858 Z82195.2-201ENST00000612348 18351 ntBASIC3.08□□□□□ -1.92
LIG1P18858 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIG1P18858 AC018630.2-201ENST00000534866 2403 ntBASIC3.08□□□□□ -1.92
LIG1P18858 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LIG1P18858 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.07□□□□□ -1.92
LIG1P18858 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
LIG1P18858 SNORA25.6-201ENST00000364121 118 ntBASIC3.07□□□□□ -1.92
LIG1P18858 SNORD116-21-201ENST00000384507 92 ntBASIC3.07□□□□□ -1.92
LIG1P18858 Y_RNA.621-201ENST00000411065 96 ntBASIC3.07□□□□□ -1.92
LIG1P18858 SNRPGP10-201ENST00000432323 225 ntBASIC3.07□□□□□ -1.92
LIG1P18858 AF228730.3-201ENST00000436691 102 ntBASIC3.07□□□□□ -1.92
LIG1P18858 Y_RNA.651-201ENST00000459380 103 ntBASIC3.07□□□□□ -1.92
LIG1P18858 MIR4679-2-201ENST00000578358 77 ntBASIC3.07□□□□□ -1.92
LIG1P18858 Y_RNA.43-201ENST00000362670 111 ntBASIC3.06□□□□□ -1.92
LIG1P18858 RNU1-112P-201ENST00000364401 164 ntBASIC3.06□□□□□ -1.92
LIG1P18858 RNU6-1164P-201ENST00000364428 107 ntBASIC3.06□□□□□ -1.92
LIG1P18858 Y_RNA.242-201ENST00000364473 110 ntBASIC3.06□□□□□ -1.92
LIG1P18858 Y_RNA.253-201ENST00000364562 112 ntBASIC3.06□□□□□ -1.92
LIG1P18858 SNORD24-201ENST00000383884 75 ntBASIC3.06□□□□□ -1.92
LIG1P18858 SNORA1-201ENST00000384107 130 ntBASIC3.06□□□□□ -1.92
LIG1P18858 MIR592-201ENST00000384959 97 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms