Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MLLT10P1-201ENST00000418346 262 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 RNU6-329P-201ENST00000459618 107 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.27□□□□□ -2.37
CTLA4P16410 AC105313.1-201ENST00000509121 353 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 Y_RNA.708-201ENST00000516950 96 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
CTLA4P16410 SNORA4-201ENST00000584302 138 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 AC005899.2-201ENST00000584353 90 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 AC022709.1-201ENST00000615967 87 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 RMST_2.1-201ENST00000617263 136 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 MIR4251-201ENST00000635819 61 ntBASIC0.27□□□□□ -2.37
CTLA4P16410 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CTLA4P16410 MIR1-1-201ENST00000362147 71 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 RNU6-654P-201ENST00000364373 107 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 Y_RNA.295-201ENST00000364918 102 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 Y_RNA.354-201ENST00000365448 111 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 Y_RNA.370-201ENST00000365589 108 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 Y_RNA.554-201ENST00000384672 102 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 RNU6-131P-201ENST00000391144 107 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 RNU2-61P-201ENST00000411069 191 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 RNU6-177P-201ENST00000411257 104 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 AC116353.2-201ENST00000505332 712 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 Y_RNA.714-201ENST00000517065 90 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 AC093027.1-201ENST00000546698 429 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 AC018638.8-201ENST00000588755 281 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 AC005972.2-201ENST00000604690 348 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.26□□□□□ -2.37
CTLA4P16410 AC008133.2-201ENST00000624540 351 ntBASIC0.26□□□□□ -2.37
CTLA4P16410 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.25□□□□□ -2.37
CTLA4P16410 Y_RNA.116-201ENST00000363292 103 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 RNU6-961P-201ENST00000363893 105 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 RNU4-24P-201ENST00000364565 139 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 SNORA36.2-201ENST00000384004 127 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 SNORA72-201ENST00000384339 132 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 SNORA2B-201ENST00000384583 137 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 RNU6-510P-201ENST00000391239 108 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 RNU2-54P-201ENST00000410299 190 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AC005534.2-201ENST00000431047 433 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 RPL17P19-201ENST00000489069 552 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AC011352.1-201ENST00000512300 793 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 MIR2115-201ENST00000516657 100 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AC055872.1-201ENST00000570978 278 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AL355375.2-201ENST00000574825 175 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 MIR4300-201ENST00000581016 96 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 MIR548AR-201ENST00000582191 57 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AL355073.2-201ENST00000612106 557 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AC240442.1-201ENST00000616055 283 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AC048344.4-201ENST00000619744 527 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AC092794.2-201ENST00000620933 563 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AC091925.1-201ENST00000623204 462 ntBASIC0.25□□□□□ -2.37
CTLA4P16410 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 Y_RNA.168-201ENST00000363740 102 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 Y_RNA.172-201ENST00000363765 102 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 RNU4-75P-201ENST00000364621 146 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 Y_RNA.368-201ENST00000365547 113 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 RNU6-42P-201ENST00000384165 107 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 Y_RNA.482-201ENST00000384377 111 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 SNRPGP10-201ENST00000432323 225 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 RPS3AP52-201ENST00000435639 297 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.24□□□□□ -2.37
CTLA4P16410 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 RNU6-307P-201ENST00000516743 106 ntBASIC0.24□□□□□ -2.37
CTLA4P16410 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.24□□□□□ -2.37
CTLA4P16410 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.24□□□□□ -2.37
CTLA4P16410 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.24□□□□□ -2.37
CTLA4P16410 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CTLA4P16410 Y_RNA.101-201ENST00000363154 102 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 Y_RNA.339-201ENST00000365325 102 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 RNU6-601P-201ENST00000384540 107 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 MIR140-201ENST00000385282 100 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 MIR548F5-201ENST00000408421 86 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 MTND4P28-201ENST00000426217 387 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
CTLA4P16410 CHEK2P4-201ENST00000450340 246 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 MIR2053-201ENST00000459295 91 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 RPL7P42-201ENST00000481005 679 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 RNU6-1012P-201ENST00000516606 109 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.23□□□□□ -2.37
CTLA4P16410 MIR1244-1-201ENST00000612829 85 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 MIR1244-3-201ENST00000635744 85 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 MIR1244-2-201ENST00000636449 85 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 MIR1244-4-202ENST00000636813 85 ntBASIC0.23□□□□□ -2.37
CTLA4P16410 Y_RNA.148-201ENST00000363557 117 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 RNU6-396P-201ENST00000365369 105 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 Y_RNA.404-201ENST00000383978 102 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 RNU6-342P-201ENST00000384521 104 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 RNU6-1199P-201ENST00000411249 104 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.22□□□□□ -2.37
CTLA4P16410 MTND3P10-201ENST00000450967 341 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.22□□□□□ -2.37
CTLA4P16410 SNORA68.3-201ENST00000515906 83 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 RNU6-436P-201ENST00000516171 114 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 RNU6-830P-201ENST00000516353 107 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 AC060780.3-201ENST00000589464 80 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 RBM11P1-201ENST00000604951 799 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms