Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD8P13378 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXD8P13378 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXD8P13378 RNU4-82P-201ENST00000362443 140 ntBASIC3.22□□□□□ -1.89
HOXD8P13378 RNU6-554P-201ENST00000410466 106 ntBASIC3.22□□□□□ -1.89
HOXD8P13378 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
HOXD8P13378 AL109933.2-201ENST00000452651 260 ntBASIC3.22□□□□□ -1.89
HOXD8P13378 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
HOXD8P13378 RN7SKP282-201ENST00000516824 299 ntBASIC3.22□□□□□ -1.89
HOXD8P13378 RNU6-667P-201ENST00000517186 102 ntBASIC3.22□□□□□ -1.89
HOXD8P13378 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXD8P13378 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXD8P13378 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
HOXD8P13378 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXD8P13378 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXD8P13378 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXD8P13378 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXD8P13378 RNA5SP383-201ENST00000362934 120 ntBASIC3.21□□□□□ -1.9
HOXD8P13378 Y_RNA.366-201ENST00000365540 102 ntBASIC3.21□□□□□ -1.9
HOXD8P13378 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
HOXD8P13378 RNU6-341P-201ENST00000516973 96 ntBASIC3.21□□□□□ -1.9
HOXD8P13378 AL356280.1-201ENST00000603614 379 ntBASIC3.21□□□□□ -1.9
HOXD8P13378 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HOXD8P13378 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXD8P13378 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXD8P13378 SNORD68-201ENST00000363214 84 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 Y_RNA.281-201ENST00000364774 94 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 RNU6-106P-201ENST00000384405 107 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 SNORA8-201ENST00000384574 139 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 MIR561-201ENST00000385216 97 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 MIR1302-5-201ENST00000408164 150 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 AC087499.2-201ENST00000432861 149 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 AL049830.1-201ENST00000468034 425 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 COX6CP6-201ENST00000490840 228 ntBASIC3.2□□□□□ -1.9
HOXD8P13378 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD8P13378 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD8P13378 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
HOXD8P13378 AL353746.1-201ENST00000566293 6881 ntBASIC3.19□□□□□ -1.9
HOXD8P13378 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
HOXD8P13378 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD8P13378 RNU6-756P-201ENST00000383997 107 ntBASIC3.19□□□□□ -1.9
HOXD8P13378 MIR9-1-201ENST00000385198 89 ntBASIC3.19□□□□□ -1.9
HOXD8P13378 MIR759-201ENST00000390224 91 ntBASIC3.19□□□□□ -1.9
HOXD8P13378 SNORD77.3-201ENST00000391113 65 ntBASIC3.19□□□□□ -1.9
HOXD8P13378 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD8P13378 RNU6-240P-201ENST00000516098 97 ntBASIC3.19□□□□□ -1.9
HOXD8P13378 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD8P13378 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD8P13378 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HOXD8P13378 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HOXD8P13378 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD8P13378 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD8P13378 MIR340-201ENST00000362125 95 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 RNU6-1084P-201ENST00000362498 107 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 SNORA63.5-201ENST00000363548 123 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 SNORD14E-201ENST00000364009 85 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 RNU6-690P-201ENST00000365242 106 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 MIR95-201ENST00000385072 81 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 RN7SL633P-201ENST00000488974 297 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXD8P13378 RNU7-128P-201ENST00000517247 62 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 AP002004.2-201ENST00000531656 154 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 AC091544.4-201ENST00000555268 342 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HOXD8P13378 AL589743.1-201ENST00000551932 2712 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
HOXD8P13378 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HOXD8P13378 Y_RNA.49-201ENST00000362714 112 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 Y_RNA.85-201ENST00000363014 111 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 Y_RNA.163-201ENST00000363702 113 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 SNORA2.2-201ENST00000365473 135 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 SNORA51.5-201ENST00000384126 131 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 MIR548O-201ENST00000408583 114 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD8P13378 RNU7-94P-201ENST00000459576 63 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXD8P13378 AL358944.1-201ENST00000528537 144 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 MIR5197-201ENST00000583721 112 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 MIR338-201ENST00000636369 67 ntBASIC3.17□□□□□ -1.9
HOXD8P13378 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HOXD8P13378 SNORA1B-201ENST00000362535 133 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 Y_RNA.213-201ENST00000364178 111 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 RNU6-442P-201ENST00000383968 104 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 Y_RNA.549-201ENST00000384657 102 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 MIR518F-201ENST00000384973 87 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 ATP5J2P3-201ENST00000451550 258 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 RNU1-41P-201ENST00000516161 162 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 RNU1-48P-201ENST00000516400 162 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXD8P13378 AC009831.4-201ENST00000620744 325 ntBASIC3.16□□□□□ -1.9
HOXD8P13378 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD8P13378 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HOXD8P13378 RNU6-766P-201ENST00000362478 107 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 RNU6-414P-201ENST00000363705 104 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 RNU6-1189P-201ENST00000383958 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms