Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.13□□□□□ -2.23
TOP1P11387 SNORD114-7-201ENST00000362520 77 ntBASIC1.13□□□□□ -2.23
TOP1P11387 RNU6-1266P-201ENST00000362794 105 ntBASIC1.13□□□□□ -2.23
TOP1P11387 RNU4-50P-201ENST00000364361 141 ntBASIC1.13□□□□□ -2.23
TOP1P11387 RNU6-1175P-201ENST00000365200 107 ntBASIC1.13□□□□□ -2.23
TOP1P11387 SNORA33.2-201ENST00000365413 134 ntBASIC1.13□□□□□ -2.23
TOP1P11387 SNORD63-201ENST00000384262 68 ntBASIC1.13□□□□□ -2.23
TOP1P11387 Y_RNA.527-201ENST00000384573 102 ntBASIC1.13□□□□□ -2.23
TOP1P11387 MIR515-2-201ENST00000384883 83 ntBASIC1.13□□□□□ -2.23
TOP1P11387 MIR515-1-201ENST00000384884 83 ntBASIC1.13□□□□□ -2.23
TOP1P11387 RPL21P1-201ENST00000399532 476 ntBASIC1.13□□□□□ -2.23
TOP1P11387 MIR873-201ENST00000401120 77 ntBASIC1.13□□□□□ -2.23
TOP1P11387 AL031003.1-201ENST00000404229 172 ntBASIC1.13□□□□□ -2.23
TOP1P11387 RPS27P22-201ENST00000478056 241 ntBASIC1.13□□□□□ -2.23
TOP1P11387 RNU6-113P-201ENST00000516653 101 ntBASIC1.13□□□□□ -2.23
TOP1P11387 RNU6-897P-201ENST00000517135 105 ntBASIC1.13□□□□□ -2.23
TOP1P11387 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TOP1P11387 AC091178.2-201ENST00000584401 117 ntBASIC1.13□□□□□ -2.23
TOP1P11387 AL390123.1-201ENST00000603216 237 ntBASIC1.13□□□□□ -2.23
TOP1P11387 Y_RNA.772-201ENST00000606692 102 ntBASIC1.13□□□□□ -2.23
TOP1P11387 AC040896.1-201ENST00000613819 479 ntBASIC1.13□□□□□ -2.23
TOP1P11387 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
TOP1P11387 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TOP1P11387 Y_RNA.26-201ENST00000362539 101 ntBASIC1.12□□□□□ -2.23
TOP1P11387 Y_RNA.202-201ENST00000364083 110 ntBASIC1.12□□□□□ -2.23
TOP1P11387 Y_RNA.286-201ENST00000364813 102 ntBASIC1.12□□□□□ -2.23
TOP1P11387 Y_RNA.326-201ENST00000365176 113 ntBASIC1.12□□□□□ -2.23
TOP1P11387 RNU6-407P-201ENST00000365280 104 ntBASIC1.12□□□□□ -2.23
TOP1P11387 Y_RNA.389-201ENST00000383924 113 ntBASIC1.12□□□□□ -2.23
TOP1P11387 Y_RNA.424-201ENST00000384063 103 ntBASIC1.12□□□□□ -2.23
TOP1P11387 Y_RNA.439-201ENST00000384119 94 ntBASIC1.12□□□□□ -2.23
TOP1P11387 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TOP1P11387 RNU6-121P-201ENST00000410525 99 ntBASIC1.12□□□□□ -2.23
TOP1P11387 RNU2-61P-201ENST00000411069 191 ntBASIC1.12□□□□□ -2.23
TOP1P11387 ELOCP20-201ENST00000422460 345 ntBASIC1.12□□□□□ -2.23
TOP1P11387 DYNLT3P2-201ENST00000442517 295 ntBASIC1.12□□□□□ -2.23
TOP1P11387 RNU6-63P-201ENST00000516690 95 ntBASIC1.12□□□□□ -2.23
TOP1P11387 RNU7-172P-201ENST00000517125 64 ntBASIC1.12□□□□□ -2.23
TOP1P11387 AC113195.1-201ENST00000579952 141 ntBASIC1.12□□□□□ -2.23
TOP1P11387 MIR4452-201ENST00000583004 71 ntBASIC1.12□□□□□ -2.23
TOP1P11387 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.12□□□□□ -2.23
TOP1P11387 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
TOP1P11387 AL391516.1-201ENST00000554380 2449 ntBASIC1.12□□□□□ -2.23
TOP1P11387 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TOP1P11387 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TOP1P11387 RNU6-1123P-201ENST00000362347 106 ntBASIC1.11□□□□□ -2.23
TOP1P11387 Y_RNA.153-201ENST00000363615 91 ntBASIC1.11□□□□□ -2.23
TOP1P11387 Y_RNA.214-201ENST00000364201 112 ntBASIC1.11□□□□□ -2.23
TOP1P11387 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.11□□□□□ -2.23
TOP1P11387 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
TOP1P11387 Y_RNA.526-201ENST00000384572 110 ntBASIC1.11□□□□□ -2.23
TOP1P11387 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
TOP1P11387 SNORD115-46-201ENST00000390982 71 ntBASIC1.11□□□□□ -2.23
TOP1P11387 RNU4-30P-201ENST00000410245 143 ntBASIC1.11□□□□□ -2.23
TOP1P11387 RNU5A-5P-201ENST00000411054 116 ntBASIC1.11□□□□□ -2.23
TOP1P11387 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.11□□□□□ -2.23
TOP1P11387 AC010154.1-201ENST00000425857 269 ntBASIC1.11□□□□□ -2.23
TOP1P11387 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.11□□□□□ -2.23
TOP1P11387 RNU6-397P-201ENST00000516226 104 ntBASIC1.11□□□□□ -2.23
TOP1P11387 RNU6-155P-201ENST00000516347 100 ntBASIC1.11□□□□□ -2.23
TOP1P11387 AP003072.1-201ENST00000531740 145 ntBASIC1.11□□□□□ -2.23
TOP1P11387 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.11□□□□□ -2.23
TOP1P11387 AC127459.3-201ENST00000624328 466 ntBASIC1.11□□□□□ -2.23
TOP1P11387 AC018630.2-201ENST00000534866 2403 ntBASIC1.11□□□□□ -2.23
TOP1P11387 Y_RNA.183-201ENST00000363882 113 ntBASIC1.1□□□□□ -2.23
TOP1P11387 RNU6-806P-201ENST00000365147 105 ntBASIC1.1□□□□□ -2.23
TOP1P11387 Y_RNA.329-201ENST00000365209 107 ntBASIC1.1□□□□□ -2.23
TOP1P11387 SNORA63.7-201ENST00000365579 123 ntBASIC1.1□□□□□ -2.23
TOP1P11387 Y_RNA.455-201ENST00000384230 98 ntBASIC1.1□□□□□ -2.23
TOP1P11387 RNU6-505P-201ENST00000384427 107 ntBASIC1.1□□□□□ -2.23
TOP1P11387 RNA5SP323-201ENST00000391094 133 ntBASIC1.1□□□□□ -2.23
TOP1P11387 RNU6-985P-201ENST00000410182 104 ntBASIC1.1□□□□□ -2.23
TOP1P11387 RNA5SP511-201ENST00000410487 115 ntBASIC1.1□□□□□ -2.23
TOP1P11387 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.1□□□□□ -2.23
TOP1P11387 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.1□□□□□ -2.23
TOP1P11387 SUMO1P2-201ENST00000452524 304 ntBASIC1.1□□□□□ -2.23
TOP1P11387 UBL5P1-201ENST00000507979 193 ntBASIC1.1□□□□□ -2.23
TOP1P11387 RNU6-1337P-201ENST00000516525 95 ntBASIC1.1□□□□□ -2.23
TOP1P11387 AL929325.1-201ENST00000603096 117 ntBASIC1.1□□□□□ -2.23
TOP1P11387 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
TOP1P11387 MIR8054-201ENST00000620877 86 ntBASIC1.1□□□□□ -2.23
TOP1P11387 MIR6079-201ENST00000635807 62 ntBASIC1.1□□□□□ -2.23
TOP1P11387 Y_RNA.222-201ENST00000364264 102 ntBASIC1.09□□□□□ -2.23
TOP1P11387 Y_RNA.380-201ENST00000365663 111 ntBASIC1.09□□□□□ -2.23
TOP1P11387 SNORD116-13-201ENST00000384408 92 ntBASIC1.09□□□□□ -2.23
TOP1P11387 RNU6-102P-201ENST00000384485 104 ntBASIC1.09□□□□□ -2.23
TOP1P11387 RNU6-136P-201ENST00000384663 107 ntBASIC1.09□□□□□ -2.23
TOP1P11387 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TOP1P11387 RNU6-101P-201ENST00000410323 104 ntBASIC1.09□□□□□ -2.23
TOP1P11387 HSPE1P13-201ENST00000451143 297 ntBASIC1.09□□□□□ -2.23
TOP1P11387 LINC01399-202ENST00000458450 244 ntBASIC1.09□□□□□ -2.23
TOP1P11387 AC091021.1-201ENST00000468051 388 ntBASIC1.09□□□□□ -2.23
TOP1P11387 AC098869.1-201ENST00000481627 292 ntBASIC1.09□□□□□ -2.23
TOP1P11387 Y_RNA.721-201ENST00000517207 102 ntBASIC1.09□□□□□ -2.23
TOP1P11387 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.09□□□□□ -2.23
TOP1P11387 MIR4300-201ENST00000581016 96 ntBASIC1.09□□□□□ -2.23
TOP1P11387 AC006380.1-201ENST00000603598 186 ntBASIC1.09□□□□□ -2.23
TOP1P11387 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.09□□□□□ -2.23
TOP1P11387 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.09□□□□□ -2.24
TOP1P11387 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms