Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RNU6-735P-201ENST00000410612 107 ntBASIC-0.89□□□□□ -2.55
TCRAP04437 RNU6-847P-201ENST00000411115 108 ntBASIC-0.89□□□□□ -2.55
TCRAP04437 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.89□□□□□ -2.55
TCRAP04437 AC090844.1-201ENST00000422019 156 ntBASIC-0.89□□□□□ -2.55
TCRAP04437 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.89□□□□□ -2.55
TCRAP04437 PRDX4P1-201ENST00000507189 574 ntBASIC-0.89□□□□□ -2.55
TCRAP04437 AC006600.1-201ENST00000572529 153 ntBASIC-0.89□□□□□ -2.55
TCRAP04437 MIR7844-201ENST00000616161 122 ntBASIC-0.89□□□□□ -2.55
TCRAP04437 MIR6514-201ENST00000622549 70 ntBASIC-0.89□□□□□ -2.55
TCRAP04437 MTND5P32-201ENST00000560711 1802 ntBASIC-0.89□□□□□ -2.55
TCRAP04437 RNU6-517P-201ENST00000384362 110 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 SNORD28-201ENST00000384706 75 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.9□□□□□ -2.55
TCRAP04437 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.9□□□□□ -2.55
TCRAP04437 RPL30P16-201ENST00000419341 429 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 SNRPGP10-201ENST00000432323 225 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 AC009961.2-201ENST00000435771 251 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 RNU7-180P-201ENST00000459240 63 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.9□□□□□ -2.55
TCRAP04437 MIR4639-201ENST00000584938 69 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 HULC.1-201ENST00000612720 240 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.9□□□□□ -2.55
TCRAP04437 AC072046.2-201ENST00000618366 268 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.9□□□□□ -2.55
TCRAP04437 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 SNORD14E-201ENST00000364009 85 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 SNORD95.1-201ENST00000364099 68 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 MIR518F-201ENST00000384973 87 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 SNORA75.1-201ENST00000391130 148 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 RNU6-855P-201ENST00000410395 104 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 RNU4-63P-201ENST00000411313 118 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 AC109327.2-201ENST00000448339 378 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 AC074198.2-201ENST00000508153 258 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 SNORA25.10-201ENST00000515926 124 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 AL355297.3-201ENST00000604082 446 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 U7.6-201ENST00000610841 64 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 AL391099.1-201ENST00000624635 187 ntBASIC-0.91□□□□□ -2.56
TCRAP04437 MIR410-201ENST00000362222 80 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 RNU6-324P-201ENST00000363957 106 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 MT-TF-201ENST00000387314 71 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 SNORA75.4-201ENST00000391278 119 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 MIR1265-201ENST00000408444 86 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 RNU4-30P-201ENST00000410245 143 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 RNU6-195P-201ENST00000411352 109 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 MTCO2P27-201ENST00000420740 428 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 AL356010.1-201ENST00000456364 102 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 snoU13.16-201ENST00000459350 104 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 AP002963.1-201ENST00000530590 184 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.92□□□□□ -2.56
TCRAP04437 AL133215.3-201ENST00000609801 448 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 MIR8066-201ENST00000617280 78 ntBASIC-0.92□□□□□ -2.56
TCRAP04437 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.93□□□□□ -2.56
TCRAP04437 AC114755.3-201ENST00000481111 251 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 RPL30P10-201ENST00000488148 337 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 CCDC34P1-201ENST00000507441 517 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 RNU6-189P-201ENST00000516120 101 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 AC134698.4-201ENST00000523451 826 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 MTND4P7-201ENST00000523876 130 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.93□□□□□ -2.56
TCRAP04437 MIR5706-201ENST00000579841 80 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 AC006380.1-201ENST00000603598 186 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 AC103705.1-201ENST00000619013 241 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 AC009161.2-201ENST00000624626 138 ntBASIC-0.93□□□□□ -2.56
TCRAP04437 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.93□□□□□ -2.56
TCRAP04437 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 RNU6-456P-201ENST00000384493 107 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 RNU6-35P-201ENST00000384530 107 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 SNORD38B-201ENST00000384690 67 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 MIR588-201ENST00000384900 83 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.94□□□□□ -2.56
TCRAP04437 RPL21P38-201ENST00000418090 167 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.94□□□□□ -2.56
TCRAP04437 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
TCRAP04437 SNORA31.14-201ENST00000516728 116 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 RNU7-181P-201ENST00000517234 74 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.94□□□□□ -2.56
TCRAP04437 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.94□□□□□ -2.56
TCRAP04437 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 AC023510.2-201ENST00000622162 746 ntBASIC-0.94□□□□□ -2.56
TCRAP04437 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.95□□□□□ -2.56
TCRAP04437 SNRPGP14-201ENST00000435400 219 ntBASIC-0.95□□□□□ -2.56
TCRAP04437 MTCO2P16-201ENST00000436962 677 ntBASIC-0.95□□□□□ -2.56
TCRAP04437 AL138752.1-201ENST00000452964 351 ntBASIC-0.95□□□□□ -2.56
TCRAP04437 AC138749.4-201ENST00000563970 127 ntBASIC-0.95□□□□□ -2.56
TCRAP04437 MIR4432-201ENST00000581823 84 ntBASIC-0.95□□□□□ -2.56
TCRAP04437 MIR3925-201ENST00000584674 77 ntBASIC-0.95□□□□□ -2.56
TCRAP04437 AC245014.2-201ENST00000603689 287 ntBASIC-0.95□□□□□ -2.56
TCRAP04437 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.96□□□□□ -2.56
TCRAP04437 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.96□□□□□ -2.56
TCRAP04437 RNU6-442P-201ENST00000383968 104 ntBASIC-0.96□□□□□ -2.56
TCRAP04437 RNU6-214P-201ENST00000384130 107 ntBASIC-0.96□□□□□ -2.56
TCRAP04437 RNY3P9-201ENST00000384727 106 ntBASIC-0.96□□□□□ -2.56
TCRAP04437 MIR563-201ENST00000385080 79 ntBASIC-0.96□□□□□ -2.56
TCRAP04437 snoU13.2-201ENST00000459201 104 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms