Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC253576.2-201ENST00000618815 580 ntBASIC-1.1□□□□□ -2.59
APOBP04114 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.1□□□□□ -2.59
APOBP04114 RNU6-784P-201ENST00000384330 106 ntBASIC-1.1□□□□□ -2.59
APOBP04114 MTATP6P20-201ENST00000414147 562 ntBASIC-1.1□□□□□ -2.59
APOBP04114 GMFBP1-201ENST00000467831 427 ntBASIC-1.1□□□□□ -2.59
APOBP04114 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.1□□□□□ -2.59
APOBP04114 U6.42-201ENST00000618440 107 ntBASIC-1.1□□□□□ -2.59
APOBP04114 U4.7-201ENST00000638126 106 ntBASIC-1.1□□□□□ -2.59
APOBP04114 RNU6-509P-201ENST00000363519 107 ntBASIC-1.1□□□□□ -2.59
APOBP04114 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.1□□□□□ -2.59
APOBP04114 MTND1P32-201ENST00000433043 938 ntBASIC-1.1□□□□□ -2.59
APOBP04114 AC073648.5-201ENST00000603502 305 ntBASIC-1.1□□□□□ -2.59
APOBP04114 AP002371.2-201ENST00000624450 503 ntBASIC-1.1□□□□□ -2.59
APOBP04114 MIR181B2-201ENST00000385004 89 ntBASIC-1.11□□□□□ -2.59
APOBP04114 SNORD93-201ENST00000408813 74 ntBASIC-1.11□□□□□ -2.59
APOBP04114 RNU7-134P-201ENST00000458997 64 ntBASIC-1.11□□□□□ -2.59
APOBP04114 MTND1P8-201ENST00000571424 950 ntBASIC-1.11□□□□□ -2.59
APOBP04114 RNU6-293P-201ENST00000411259 106 ntBASIC-1.11□□□□□ -2.59
APOBP04114 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.11□□□□□ -2.59
APOBP04114 SNORD123-201ENST00000459473 70 ntBASIC-1.11□□□□□ -2.59
APOBP04114 SNORA25.16-201ENST00000516741 121 ntBASIC-1.11□□□□□ -2.59
APOBP04114 SLC2A13P1-201ENST00000531560 322 ntBASIC-1.11□□□□□ -2.59
APOBP04114 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.11□□□□□ -2.59
APOBP04114 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.11□□□□□ -2.59
APOBP04114 AL356055.1-201ENST00000602528 446 ntBASIC-1.11□□□□□ -2.59
APOBP04114 MIR8066-201ENST00000617280 78 ntBASIC-1.11□□□□□ -2.59
APOBP04114 AC078880.5-201ENST00000617845 421 ntBASIC-1.11□□□□□ -2.59
APOBP04114 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.11□□□□□ -2.59
APOBP04114 RNU1-141P-201ENST00000364623 158 ntBASIC-1.11□□□□□ -2.59
APOBP04114 MIR586-201ENST00000385035 97 ntBASIC-1.11□□□□□ -2.59
APOBP04114 AL606845.1-201ENST00000404881 255 ntBASIC-1.11□□□□□ -2.59
APOBP04114 RNU6-721P-201ENST00000410155 105 ntBASIC-1.11□□□□□ -2.59
APOBP04114 AC013470.1-201ENST00000453438 462 ntBASIC-1.11□□□□□ -2.59
APOBP04114 SNORD2-201ENST00000459163 69 ntBASIC-1.11□□□□□ -2.59
APOBP04114 RNU7-57P-201ENST00000459540 60 ntBASIC-1.11□□□□□ -2.59
APOBP04114 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.11□□□□□ -2.59
APOBP04114 AL357078.3-201ENST00000607528 618 ntBASIC-1.11□□□□□ -2.59
APOBP04114 AC091948.2-201ENST00000636510 279 ntBASIC-1.11□□□□□ -2.59
APOBP04114 RNU6-377P-201ENST00000515965 102 ntBASIC-1.11□□□□□ -2.59
APOBP04114 RNU7-188P-201ENST00000517063 64 ntBASIC-1.11□□□□□ -2.59
APOBP04114 AC011373.1-201ENST00000607270 237 ntBASIC-1.11□□□□□ -2.59
APOBP04114 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.12□□□□□ -2.59
APOBP04114 MIR208B-201ENST00000401172 77 ntBASIC-1.12□□□□□ -2.59
APOBP04114 MTATP6P14-201ENST00000455189 673 ntBASIC-1.12□□□□□ -2.59
APOBP04114 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.12□□□□□ -2.59
APOBP04114 RNU6-803P-201ENST00000516034 102 ntBASIC-1.12□□□□□ -2.59
APOBP04114 RNU6-765P-201ENST00000516916 99 ntBASIC-1.12□□□□□ -2.59
APOBP04114 MIR548AM-201ENST00000584298 74 ntBASIC-1.12□□□□□ -2.59
APOBP04114 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.12□□□□□ -2.59
APOBP04114 U3.4-201ENST00000363352 213 ntBASIC-1.12□□□□□ -2.59
APOBP04114 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.12□□□□□ -2.59
APOBP04114 RNU6-343P-201ENST00000364709 104 ntBASIC-1.12□□□□□ -2.59
APOBP04114 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.12□□□□□ -2.59
APOBP04114 RNU6-125P-201ENST00000384505 107 ntBASIC-1.12□□□□□ -2.59
APOBP04114 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.12□□□□□ -2.59
APOBP04114 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.12□□□□□ -2.59
APOBP04114 snoU13.2-201ENST00000459201 104 ntBASIC-1.12□□□□□ -2.59
APOBP04114 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.12□□□□□ -2.59
APOBP04114 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.12□□□□□ -2.59
APOBP04114 ZNF321P-202ENST00000550843 495 ntBASIC-1.12□□□□□ -2.59
APOBP04114 AC087683.1-201ENST00000591187 441 ntBASIC-1.12□□□□□ -2.59
APOBP04114 MTCO3P40-201ENST00000392516 676 ntBASIC-1.12□□□□□ -2.59
APOBP04114 AC114491.1-201ENST00000416095 246 ntBASIC-1.12□□□□□ -2.59
APOBP04114 AC010655.3-201ENST00000478818 450 ntBASIC-1.12□□□□□ -2.59
APOBP04114 MIR4756-201ENST00000577874 78 ntBASIC-1.12□□□□□ -2.59
APOBP04114 RNU6-527P-201ENST00000363425 104 ntBASIC-1.13□□□□□ -2.59
APOBP04114 RNU6-817P-201ENST00000391083 104 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AL078595.1-201ENST00000404458 226 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AL358934.1-201ENST00000432346 324 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AC104563.1-201ENST00000476147 376 ntBASIC-1.13□□□□□ -2.59
APOBP04114 SNORD45.4-201ENST00000516629 73 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AC091965.4-201ENST00000607691 587 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AL445523.1-201ENST00000451184 1362 ntBASIC-1.13□□□□□ -2.59
APOBP04114 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AL603914.1-201ENST00000401964 204 ntBASIC-1.13□□□□□ -2.59
APOBP04114 RNU6-847P-201ENST00000411115 108 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.13□□□□□ -2.59
APOBP04114 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.13□□□□□ -2.59
APOBP04114 AC119751.4-201ENST00000507498 357 ntBASIC-1.13□□□□□ -2.59
APOBP04114 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.13□□□□□ -2.59
APOBP04114 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.13□□□□□ -2.59
APOBP04114 AC104073.3-201ENST00000610942 955 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.13□□□□□ -2.59
APOBP04114 SNORD28B-201ENST00000390993 75 ntBASIC-1.13□□□□□ -2.59
APOBP04114 U8.19-201ENST00000459095 133 ntBASIC-1.13□□□□□ -2.59
APOBP04114 AC005178.1-201ENST00000508392 440 ntBASIC-1.13□□□□□ -2.59
APOBP04114 RNA5SP135-201ENST00000517019 125 ntBASIC-1.13□□□□□ -2.59
APOBP04114 Z97988.1-201ENST00000637697 135 ntBASIC-1.13□□□□□ -2.59
APOBP04114 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.13□□□□□ -2.59
APOBP04114 RPL23AP30-201ENST00000432419 501 ntBASIC-1.13□□□□□ -2.59
APOBP04114 RNU7-172P-201ENST00000517125 64 ntBASIC-1.13□□□□□ -2.59
APOBP04114 MIR548AC-201ENST00000585049 88 ntBASIC-1.13□□□□□ -2.59
APOBP04114 RNU6-552P-201ENST00000362869 119 ntBASIC-1.14□□□□□ -2.59
APOBP04114 AC010486.2-201ENST00000505572 483 ntBASIC-1.14□□□□□ -2.59
APOBP04114 RNU6-484P-201ENST00000384016 107 ntBASIC-1.14□□□□□ -2.59
APOBP04114 snoU13.16-201ENST00000459350 104 ntBASIC-1.14□□□□□ -2.59
APOBP04114 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-1.14□□□□□ -2.59
APOBP04114 AC127455.1-201ENST00000565496 145 ntBASIC-1.14□□□□□ -2.59
APOBP04114 AC097478.2-201ENST00000610572 514 ntBASIC-1.14□□□□□ -2.59
APOBP04114 RNU6-839P-201ENST00000363347 108 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms