Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU7-94P-201ENST00000459576 63 ntBASIC1.49□□□□□ -2.17
VTNP04004 RPS26P45-201ENST00000471748 340 ntBASIC1.49□□□□□ -2.17
VTNP04004 RNA5SP481-201ENST00000516814 122 ntBASIC1.49□□□□□ -2.17
VTNP04004 SCARNA24.2-201ENST00000516968 130 ntBASIC1.49□□□□□ -2.17
VTNP04004 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.49□□□□□ -2.17
VTNP04004 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.49□□□□□ -2.17
VTNP04004 AL929325.1-201ENST00000603096 117 ntBASIC1.49□□□□□ -2.17
VTNP04004 AC136443.5-201ENST00000603741 370 ntBASIC1.49□□□□□ -2.17
VTNP04004 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VTNP04004 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
VTNP04004 SNORD114-7-201ENST00000362520 77 ntBASIC1.48□□□□□ -2.17
VTNP04004 RNU6-1309P-201ENST00000363305 108 ntBASIC1.48□□□□□ -2.17
VTNP04004 Y_RNA.176-201ENST00000363815 109 ntBASIC1.48□□□□□ -2.17
VTNP04004 Y_RNA.226-201ENST00000364337 114 ntBASIC1.48□□□□□ -2.17
VTNP04004 RNU6-117P-201ENST00000365415 107 ntBASIC1.48□□□□□ -2.17
VTNP04004 RNU6-338P-201ENST00000383888 105 ntBASIC1.48□□□□□ -2.17
VTNP04004 Y_RNA.541-201ENST00000384640 113 ntBASIC1.48□□□□□ -2.17
VTNP04004 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.48□□□□□ -2.17
VTNP04004 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.48□□□□□ -2.17
VTNP04004 RPS27P1-201ENST00000450552 247 ntBASIC1.48□□□□□ -2.17
VTNP04004 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
VTNP04004 snoU13.27-201ENST00000459278 104 ntBASIC1.48□□□□□ -2.17
VTNP04004 AC004223.1-201ENST00000479840 271 ntBASIC1.48□□□□□ -2.17
VTNP04004 RNU2-56P-201ENST00000516826 190 ntBASIC1.48□□□□□ -2.17
VTNP04004 RNU6-1096P-201ENST00000517089 102 ntBASIC1.48□□□□□ -2.17
VTNP04004 MIR4709-201ENST00000577272 72 ntBASIC1.48□□□□□ -2.17
VTNP04004 MIR8054-201ENST00000620877 86 ntBASIC1.48□□□□□ -2.17
VTNP04004 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
VTNP04004 AC068647.2-201ENST00000637380 353 ntBASIC1.48□□□□□ -2.17
VTNP04004 Y_RNA.16-201ENST00000362421 102 ntBASIC1.47□□□□□ -2.17
VTNP04004 Y_RNA.84-201ENST00000363011 104 ntBASIC1.47□□□□□ -2.17
VTNP04004 Y_RNA.265-201ENST00000364677 108 ntBASIC1.47□□□□□ -2.17
VTNP04004 Y_RNA.361-201ENST00000365515 120 ntBASIC1.47□□□□□ -2.17
VTNP04004 Y_RNA.581-201ENST00000391017 97 ntBASIC1.47□□□□□ -2.17
VTNP04004 SNORA53-201ENST00000391141 249 ntBASIC1.47□□□□□ -2.17
VTNP04004 HSPE1P13-201ENST00000451143 297 ntBASIC1.47□□□□□ -2.17
VTNP04004 RPS20P10-201ENST00000451209 253 ntBASIC1.47□□□□□ -2.17
VTNP04004 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.47□□□□□ -2.17
VTNP04004 RNU6-1045P-201ENST00000516321 107 ntBASIC1.47□□□□□ -2.17
VTNP04004 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
VTNP04004 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
VTNP04004 AL512605.2-201ENST00000592972 256 ntBASIC1.47□□□□□ -2.17
VTNP04004 AC037487.3-201ENST00000606668 112 ntBASIC1.47□□□□□ -2.17
VTNP04004 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VTNP04004 AC100821.1-201ENST00000523153 2479 ntBASIC1.46□□□□□ -2.18
VTNP04004 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VTNP04004 RNU6-290P-201ENST00000365212 101 ntBASIC1.46□□□□□ -2.18
VTNP04004 RNU6-53P-201ENST00000365367 106 ntBASIC1.46□□□□□ -2.18
VTNP04004 Y_RNA.418-201ENST00000384029 102 ntBASIC1.46□□□□□ -2.18
VTNP04004 RNU6-203P-201ENST00000384038 104 ntBASIC1.46□□□□□ -2.18
VTNP04004 RNU6-514P-201ENST00000384208 107 ntBASIC1.46□□□□□ -2.18
VTNP04004 Y_RNA.574-201ENST00000384766 95 ntBASIC1.46□□□□□ -2.18
VTNP04004 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
VTNP04004 RNU6-360P-201ENST00000390944 104 ntBASIC1.46□□□□□ -2.18
VTNP04004 RN7SKP200-201ENST00000410564 320 ntBASIC1.46□□□□□ -2.18
VTNP04004 FTH1P12-201ENST00000432137 551 ntBASIC1.46□□□□□ -2.18
VTNP04004 AL162725.1-201ENST00000435405 301 ntBASIC1.46□□□□□ -2.18
VTNP04004 STAG3L5P-204ENST00000443759 179 ntBASIC1.46□□□□□ -2.18
VTNP04004 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.46□□□□□ -2.18
VTNP04004 HMGN1P10-201ENST00000474557 553 ntBASIC1.46□□□□□ -2.18
VTNP04004 SNORA31.10-201ENST00000516482 106 ntBASIC1.46□□□□□ -2.18
VTNP04004 RNU2-31P-201ENST00000516954 155 ntBASIC1.46□□□□□ -2.18
VTNP04004 DEFB108E-201ENST00000524692 240 ntBASIC1.46□□□□□ -2.18
VTNP04004 SNORA77B-201ENST00000578179 125 ntBASIC1.46□□□□□ -2.18
VTNP04004 AC004832.4-201ENST00000608952 331 ntBASIC1.46□□□□□ -2.18
VTNP04004 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.46□□□□□ -2.18
VTNP04004 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
VTNP04004 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VTNP04004 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
VTNP04004 SNORA25.1-201ENST00000362326 128 ntBASIC1.45□□□□□ -2.18
VTNP04004 SNORA1B-201ENST00000362535 133 ntBASIC1.45□□□□□ -2.18
VTNP04004 RNU6-1048P-201ENST00000364054 107 ntBASIC1.45□□□□□ -2.18
VTNP04004 Y_RNA.376-201ENST00000365638 108 ntBASIC1.45□□□□□ -2.18
VTNP04004 RNU6-1080P-201ENST00000383982 107 ntBASIC1.45□□□□□ -2.18
VTNP04004 RNU6-950P-201ENST00000384651 107 ntBASIC1.45□□□□□ -2.18
VTNP04004 MIR520G-201ENST00000385064 90 ntBASIC1.45□□□□□ -2.18
VTNP04004 snoU13.9-201ENST00000458927 103 ntBASIC1.45□□□□□ -2.18
VTNP04004 AL049830.1-201ENST00000468034 425 ntBASIC1.45□□□□□ -2.18
VTNP04004 RNU6-191P-201ENST00000516295 94 ntBASIC1.45□□□□□ -2.18
VTNP04004 RNU6-341P-201ENST00000516973 96 ntBASIC1.45□□□□□ -2.18
VTNP04004 AC005972.2-201ENST00000604690 348 ntBASIC1.45□□□□□ -2.18
VTNP04004 PRR13P7-201ENST00000605538 430 ntBASIC1.45□□□□□ -2.18
VTNP04004 AC095038.3-201ENST00000634439 195 ntBASIC1.45□□□□□ -2.18
VTNP04004 AC134026.1-201ENST00000623249 2239 ntBASIC1.44□□□□□ -2.18
VTNP04004 MIR126-201ENST00000362291 85 ntBASIC1.44□□□□□ -2.18
VTNP04004 Y_RNA.47-201ENST00000362697 108 ntBASIC1.44□□□□□ -2.18
VTNP04004 Y_RNA.149-201ENST00000363558 117 ntBASIC1.44□□□□□ -2.18
VTNP04004 Y_RNA.310-201ENST00000365063 113 ntBASIC1.44□□□□□ -2.18
VTNP04004 RNU6-1248P-201ENST00000391096 64 ntBASIC1.44□□□□□ -2.18
VTNP04004 MIR1302-6-201ENST00000408466 90 ntBASIC1.44□□□□□ -2.18
VTNP04004 MIR1267-201ENST00000408723 78 ntBASIC1.44□□□□□ -2.18
VTNP04004 MTCO1P5-201ENST00000433573 344 ntBASIC1.44□□□□□ -2.18
VTNP04004 RPS4XP11-201ENST00000446897 772 ntBASIC1.44□□□□□ -2.18
VTNP04004 TRBVB-201ENST00000477100 408 ntBASIC1.44□□□□□ -2.18
VTNP04004 AC117454.1-201ENST00000491120 168 ntBASIC1.44□□□□□ -2.18
VTNP04004 HMGN1P7-201ENST00000491722 313 ntBASIC1.44□□□□□ -2.18
VTNP04004 AC011604.1-201ENST00000545978 196 ntBASIC1.44□□□□□ -2.18
VTNP04004 AL117187.1-201ENST00000555482 181 ntBASIC1.44□□□□□ -2.18
VTNP04004 AC091178.2-201ENST00000584401 117 ntBASIC1.44□□□□□ -2.18
VTNP04004 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms