Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.5□□□□□ -1.85
PTCD1O75127 AC096725.1-201ENST00000514266 313 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 RNU6-109P-201ENST00000516364 107 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 RNU6-184P-201ENST00000516514 107 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 RNU6-1096P-201ENST00000517089 102 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 AC097639.2-201ENST00000603159 172 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 AC245060.5-201ENST00000610778 3293 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 RNU6-461P-201ENST00000364195 107 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 RNU6-805P-201ENST00000365643 106 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 SNORA67.4-201ENST00000384688 142 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 MIR891A-201ENST00000401237 79 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 RNU2-70P-201ENST00000410718 179 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 RNU2-55P-201ENST00000411146 174 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 AC245102.2-201ENST00000448956 180 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 RN7SL330P-201ENST00000469709 307 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 AC011406.1-201ENST00000512440 370 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 RNU1-41P-201ENST00000516161 162 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 RNU1-48P-201ENST00000516400 162 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 RNU6-1231P-201ENST00000517185 103 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 AC245166.1-201ENST00000521012 253 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 uc_338.4-201ENST00000616635 176 ntBASIC3.49□□□□□ -1.85
PTCD1O75127 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PTCD1O75127 RNA5SP432-201ENST00000362480 116 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 RNU6-1209P-201ENST00000363655 107 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 AL590004.2-201ENST00000404787 371 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 SNORA19.1-201ENST00000410656 129 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.48□□□□□ -1.85
PTCD1O75127 AL513477.1-202ENST00000417061 214 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 AL021397.1-201ENST00000451806 248 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 AC003982.1-202ENST00000469928 248 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 RNU6-1041P-201ENST00000516254 102 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 RNU6-412P-201ENST00000516434 106 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 AC007751.1-201ENST00000529260 376 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 JPX_2.1-201ENST00000614161 69 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 AL590808.1-201ENST00000618696 141 ntBASIC3.48□□□□□ -1.85
PTCD1O75127 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PTCD1O75127 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCD1O75127 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PTCD1O75127 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTCD1O75127 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PTCD1O75127 snoU2-30.2-201ENST00000362805 70 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 Y_RNA.796-201ENST00000364268 102 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 Y_RNA.799-201ENST00000364992 102 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 RPL21P3-201ENST00000395517 478 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 RNA5SP293-201ENST00000410527 113 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AC003685.2-201ENST00000422795 395 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 RPS15AP28-201ENST00000435088 386 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AC233266.1-201ENST00000454518 96 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AC018868.1-201ENST00000491307 315 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 SNORD77.4-201ENST00000516158 81 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 RNA5SP236-201ENST00000516169 116 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 RN7SKP12-201ENST00000516275 143 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AC068657.1-201ENST00000520807 306 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AC007229.1-201ENST00000590455 412 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AC242852.1-201ENST00000612151 96 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AL442128.1-201ENST00000615151 90 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AC244015.1-201ENST00000622301 99 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 AC093831.2-201ENST00000624393 3427 ntBASIC3.47□□□□□ -1.85
PTCD1O75127 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.46□□□□□ -1.86
PTCD1O75127 RNU6-1014P-201ENST00000383940 103 ntBASIC3.46□□□□□ -1.86
PTCD1O75127 MIR520G-201ENST00000385064 90 ntBASIC3.46□□□□□ -1.86
PTCD1O75127 RPL39P34-201ENST00000477141 156 ntBASIC3.46□□□□□ -1.86
PTCD1O75127 RNU6-365P-201ENST00000517113 106 ntBASIC3.46□□□□□ -1.86
PTCD1O75127 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTCD1O75127 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PTCD1O75127 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCD1O75127 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCD1O75127 SNORA25B-201ENST00000365507 128 ntBASIC3.45□□□□□ -1.86
PTCD1O75127 AL159169.1-201ENST00000421119 127 ntBASIC3.45□□□□□ -1.86
PTCD1O75127 SNORD11-201ENST00000459124 84 ntBASIC3.45□□□□□ -1.86
PTCD1O75127 SNORA40.13-201ENST00000516379 120 ntBASIC3.45□□□□□ -1.86
PTCD1O75127 RNA5SP153-201ENST00000516498 76 ntBASIC3.45□□□□□ -1.86
PTCD1O75127 SNORD53-201ENST00000579969 78 ntBASIC3.45□□□□□ -1.86
PTCD1O75127 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PTCD1O75127 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.45□□□□□ -1.86
PTCD1O75127 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCD1O75127 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.44□□□□□ -1.86
PTCD1O75127 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCD1O75127 MIR590-201ENST00000385008 97 ntBASIC3.44□□□□□ -1.86
PTCD1O75127 RNA5SP467-201ENST00000391274 118 ntBASIC3.44□□□□□ -1.86
PTCD1O75127 EDDM3CP-201ENST00000415977 425 ntBASIC3.44□□□□□ -1.86
PTCD1O75127 ARF4P2-201ENST00000430209 526 ntBASIC3.44□□□□□ -1.86
PTCD1O75127 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.44□□□□□ -1.86
PTCD1O75127 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
PTCD1O75127 MIR3616-201ENST00000584070 92 ntBASIC3.44□□□□□ -1.86
PTCD1O75127 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PTCD1O75127 Y_RNA.66-201ENST00000362862 102 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 SNORA63.5-201ENST00000363548 123 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 RNU1-96P-201ENST00000364163 162 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 SNORA1-201ENST00000384107 130 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 SNORA70B-201ENST00000384210 135 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 MIR570-201ENST00000384917 97 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 MIR624-201ENST00000385217 97 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PTCD1O75127 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.43□□□□□ -1.86
PTCD1O75127 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 RNU7-99P-201ENST00000516271 62 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 SNORA18.4-201ENST00000516440 124 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 RNU6-1291P-201ENST00000516591 104 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 RNU1-104P-201ENST00000517280 175 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms