Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-918P-201ENST00000391219 106 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 MIR1185-2-201ENST00000408687 86 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 AL353689.1-201ENST00000438895 199 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 RNU1-123P-201ENST00000458950 160 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 RNU7-14P-201ENST00000459331 62 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.73□□□□□ -2.13
CACNA1FO60840 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 RNU6-586P-201ENST00000517265 104 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.73□□□□□ -2.13
CACNA1FO60840 NDUFA5P6-201ENST00000542110 379 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 RPL17P51-201ENST00000605218 238 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 AL353770.2-201ENST00000620024 78 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 CENPCP1-201ENST00000533085 2578 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 MIR337-201ENST00000362281 93 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 RNU6-1020P-201ENST00000363684 107 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 Y_RNA.310-201ENST00000365063 113 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 RNU6-53P-201ENST00000365367 106 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 RNU6-546P-201ENST00000383991 107 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 RNU6-1235P-201ENST00000384559 107 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 MIR7-2-201ENST00000384970 110 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 SNORD65B-201ENST00000459126 73 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 RNU6-498P-201ENST00000459468 107 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.72□□□□□ -2.13
CACNA1FO60840 MRPS17P9-201ENST00000511924 393 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 AC022616.8-201ENST00000533569 253 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CACNA1FO60840 RNU6-653P-201ENST00000363074 106 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 RNU6-392P-201ENST00000364926 101 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 SNORD31B-201ENST00000364977 69 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 Y_RNA.555-201ENST00000384673 110 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 RPL30P4-201ENST00000429309 333 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 AL161788.1-201ENST00000441805 169 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.72□□□□□ -2.13
CACNA1FO60840 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1FO60840 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 AL355297.2-201ENST00000604792 129 ntBASIC1.72□□□□□ -2.13
CACNA1FO60840 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
CACNA1FO60840 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CACNA1FO60840 SNORD116-13-201ENST00000384408 92 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 MIR561-201ENST00000385216 97 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 MIR548B-201ENST00000385247 97 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 RNU6-57P-201ENST00000411348 103 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 AC016925.1-201ENST00000458303 298 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 AC055731.1-201ENST00000474387 401 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.71□□□□□ -2.14
CACNA1FO60840 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1FO60840 AC024405.2-202ENST00000532731 184 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 POLR3GP1-201ENST00000594073 261 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 RNU2-4P-201ENST00000606190 192 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.71□□□□□ -2.14
CACNA1FO60840 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.71□□□□□ -2.14
CACNA1FO60840 SNORA27.1-201ENST00000362604 124 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNU1-72P-201ENST00000362976 153 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 U3.8-201ENST00000363675 217 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 SNORA8.3-201ENST00000384679 139 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 SNORA19-201ENST00000384737 128 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 SNORA26.5-201ENST00000391215 123 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC016717.1-201ENST00000448918 286 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RPS27P22-201ENST00000478056 241 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC093259.1-201ENST00000509755 300 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC136628.3-201ENST00000521868 290 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC018630.3-201ENST00000542637 96 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AL137100.2-201ENST00000555786 315 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC005972.2-201ENST00000604690 348 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC004832.4-201ENST00000608952 331 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC008873.1-201ENST00000625051 138 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNU6-1272P-201ENST00000362776 107 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 Y_RNA.180-201ENST00000363867 113 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNY1-201ENST00000364228 113 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNU6-728P-201ENST00000365375 104 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 Y_RNA.412-201ENST00000384001 104 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNU6-975P-201ENST00000384296 105 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 Y_RNA.540-201ENST00000384638 111 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 MIR300-201ENST00000401138 83 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AL355796.1-201ENST00000406706 323 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNU2-63P-201ENST00000410792 194 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 TOMM22P2-201ENST00000430735 237 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNU6-221P-201ENST00000459541 99 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC097462.1-201ENST00000514125 324 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNU6-191P-201ENST00000516295 94 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 RNU6-1337P-201ENST00000516525 95 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AC100767.1-201ENST00000528178 123 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 MIR3126-201ENST00000577443 74 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
CACNA1FO60840 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CACNA1FO60840 Y_RNA.124-201ENST00000363339 93 ntBASIC1.69□□□□□ -2.14
CACNA1FO60840 RNU6-899P-201ENST00000363947 107 ntBASIC1.69□□□□□ -2.14
CACNA1FO60840 RNU4-10P-201ENST00000364383 140 ntBASIC1.69□□□□□ -2.14
CACNA1FO60840 Y_RNA.287-201ENST00000364853 94 ntBASIC1.69□□□□□ -2.14
CACNA1FO60840 Y_RNA.571-201ENST00000384753 98 ntBASIC1.69□□□□□ -2.14
CACNA1FO60840 AL356379.1-201ENST00000414105 126 ntBASIC1.69□□□□□ -2.14
CACNA1FO60840 Y_RNA.637-201ENST00000459424 114 ntBASIC1.69□□□□□ -2.14
CACNA1FO60840 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.69□□□□□ -2.14
CACNA1FO60840 RNU6-1146P-201ENST00000516282 102 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms