Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 Y_RNA.418-201ENST00000384029 102 ntBASIC1.47□□□□□ -2.17
SSX4O60224 Y_RNA.422-201ENST00000384054 114 ntBASIC1.47□□□□□ -2.17
SSX4O60224 RNU6-1011P-201ENST00000384668 107 ntBASIC1.47□□□□□ -2.17
SSX4O60224 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SSX4O60224 Y_RNA.581-201ENST00000391017 97 ntBASIC1.47□□□□□ -2.17
SSX4O60224 RNU1-78P-201ENST00000391248 165 ntBASIC1.47□□□□□ -2.17
SSX4O60224 RPL21P38-201ENST00000418090 167 ntBASIC1.47□□□□□ -2.17
SSX4O60224 Z98949.2-201ENST00000440996 144 ntBASIC1.47□□□□□ -2.17
SSX4O60224 RNA5SP168-201ENST00000516642 112 ntBASIC1.47□□□□□ -2.17
SSX4O60224 MIR4422-201ENST00000581938 83 ntBASIC1.47□□□□□ -2.17
SSX4O60224 MIR4781-201ENST00000585250 76 ntBASIC1.47□□□□□ -2.17
SSX4O60224 SNORD3E-202ENST00000627253 216 ntBASIC1.47□□□□□ -2.17
SSX4O60224 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SSX4O60224 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SSX4O60224 Y_RNA.64-201ENST00000362845 102 ntBASIC1.46□□□□□ -2.18
SSX4O60224 snoU2_19.2-201ENST00000363024 80 ntBASIC1.46□□□□□ -2.18
SSX4O60224 RNU6-424P-201ENST00000384367 105 ntBASIC1.46□□□□□ -2.18
SSX4O60224 MIR215-201ENST00000384858 110 ntBASIC1.46□□□□□ -2.18
SSX4O60224 MIR660-201ENST00000385235 97 ntBASIC1.46□□□□□ -2.18
SSX4O60224 U8.16-201ENST00000391279 133 ntBASIC1.46□□□□□ -2.18
SSX4O60224 RNU4-62P-201ENST00000410125 130 ntBASIC1.46□□□□□ -2.18
SSX4O60224 AC079140.2-201ENST00000506193 142 ntBASIC1.46□□□□□ -2.18
SSX4O60224 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
SSX4O60224 AL442663.2-201ENST00000554385 511 ntBASIC1.46□□□□□ -2.18
SSX4O60224 RNU6-1323P-201ENST00000384025 107 ntBASIC1.45□□□□□ -2.18
SSX4O60224 SNORA72-201ENST00000384339 132 ntBASIC1.45□□□□□ -2.18
SSX4O60224 Y_RNA.569-201ENST00000384749 103 ntBASIC1.45□□□□□ -2.18
SSX4O60224 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
SSX4O60224 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
SSX4O60224 RNU6-1143P-201ENST00000516125 104 ntBASIC1.45□□□□□ -2.18
SSX4O60224 RNU6-191P-201ENST00000516295 94 ntBASIC1.45□□□□□ -2.18
SSX4O60224 AP003733.2-201ENST00000529409 171 ntBASIC1.45□□□□□ -2.18
SSX4O60224 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.45□□□□□ -2.18
SSX4O60224 MIR4303-201ENST00000581299 66 ntBASIC1.45□□□□□ -2.18
SSX4O60224 AC006504.6-201ENST00000590142 199 ntBASIC1.45□□□□□ -2.18
SSX4O60224 PRR13P7-201ENST00000605538 430 ntBASIC1.45□□□□□ -2.18
SSX4O60224 AL365434.2-201ENST00000607979 234 ntBASIC1.45□□□□□ -2.18
SSX4O60224 Y_RNA.812-201ENST00000610788 101 ntBASIC1.45□□□□□ -2.18
SSX4O60224 Y_RNA.784-201ENST00000613803 101 ntBASIC1.45□□□□□ -2.18
SSX4O60224 Y_RNA.787-201ENST00000616522 101 ntBASIC1.45□□□□□ -2.18
SSX4O60224 Y_RNA.780-201ENST00000617336 101 ntBASIC1.45□□□□□ -2.18
SSX4O60224 Y_RNA.801-201ENST00000619005 101 ntBASIC1.45□□□□□ -2.18
SSX4O60224 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSX4O60224 MIRLET7C-201ENST00000362160 84 ntBASIC1.44□□□□□ -2.18
SSX4O60224 MIR337-201ENST00000362281 93 ntBASIC1.44□□□□□ -2.18
SSX4O60224 Y_RNA.541-201ENST00000384640 113 ntBASIC1.44□□□□□ -2.18
SSX4O60224 RNU6-1248P-201ENST00000391096 64 ntBASIC1.44□□□□□ -2.18
SSX4O60224 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.44□□□□□ -2.18
SSX4O60224 AC027119.1-201ENST00000440877 241 ntBASIC1.44□□□□□ -2.18
SSX4O60224 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.44□□□□□ -2.18
SSX4O60224 MIR4778-201ENST00000577635 80 ntBASIC1.44□□□□□ -2.18
SSX4O60224 POLR3GP1-201ENST00000594073 261 ntBASIC1.44□□□□□ -2.18
SSX4O60224 AL591926.4-201ENST00000616895 298 ntBASIC1.44□□□□□ -2.18
SSX4O60224 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SSX4O60224 SNORD33-201ENST00000362761 85 ntBASIC1.43□□□□□ -2.18
SSX4O60224 SNORD68-201ENST00000363214 84 ntBASIC1.43□□□□□ -2.18
SSX4O60224 Y_RNA.136-201ENST00000363444 102 ntBASIC1.43□□□□□ -2.18
SSX4O60224 RNU6-801P-201ENST00000364087 105 ntBASIC1.43□□□□□ -2.18
SSX4O60224 U8.7-201ENST00000364940 136 ntBASIC1.43□□□□□ -2.18
SSX4O60224 RNU6-290P-201ENST00000365212 101 ntBASIC1.43□□□□□ -2.18
SSX4O60224 RNU6-1160P-201ENST00000384546 104 ntBASIC1.43□□□□□ -2.18
SSX4O60224 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
SSX4O60224 AP1B1P2-201ENST00000416196 106 ntBASIC1.43□□□□□ -2.18
SSX4O60224 MTCO1P5-201ENST00000433573 344 ntBASIC1.43□□□□□ -2.18
SSX4O60224 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.43□□□□□ -2.18
SSX4O60224 AL731563.1-201ENST00000442202 214 ntBASIC1.43□□□□□ -2.18
SSX4O60224 AC245517.4-201ENST00000448601 281 ntBASIC1.43□□□□□ -2.18
SSX4O60224 AC117454.1-201ENST00000491120 168 ntBASIC1.43□□□□□ -2.18
SSX4O60224 RNA5SP445-201ENST00000515889 115 ntBASIC1.43□□□□□ -2.18
SSX4O60224 RNU7-116P-201ENST00000516940 62 ntBASIC1.43□□□□□ -2.18
SSX4O60224 AC136628.3-201ENST00000521868 290 ntBASIC1.43□□□□□ -2.18
SSX4O60224 AC024405.2-202ENST00000532731 184 ntBASIC1.43□□□□□ -2.18
SSX4O60224 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
SSX4O60224 MIR3937-201ENST00000580135 106 ntBASIC1.43□□□□□ -2.18
SSX4O60224 AP003357.1-201ENST00000604497 148 ntBASIC1.43□□□□□ -2.18
SSX4O60224 AC106754.2-201ENST00000623006 233 ntBASIC1.43□□□□□ -2.18
SSX4O60224 RNU6-1048P-201ENST00000364054 107 ntBASIC1.42□□□□□ -2.18
SSX4O60224 Y_RNA.253-201ENST00000364562 112 ntBASIC1.42□□□□□ -2.18
SSX4O60224 RNU6-1105P-201ENST00000384774 107 ntBASIC1.42□□□□□ -2.18
SSX4O60224 MIR606-201ENST00000384851 96 ntBASIC1.42□□□□□ -2.18
SSX4O60224 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
SSX4O60224 RNU2-14P-201ENST00000411053 191 ntBASIC1.42□□□□□ -2.18
SSX4O60224 RPL30P13-201ENST00000418873 348 ntBASIC1.42□□□□□ -2.18
SSX4O60224 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.42□□□□□ -2.18
SSX4O60224 RPS27P16-201ENST00000425758 201 ntBASIC1.42□□□□□ -2.18
SSX4O60224 AC104332.1-201ENST00000440471 797 ntBASIC1.42□□□□□ -2.18
SSX4O60224 DYNLT3P2-201ENST00000442517 295 ntBASIC1.42□□□□□ -2.18
SSX4O60224 AC093850.1-201ENST00000454121 251 ntBASIC1.42□□□□□ -2.18
SSX4O60224 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
SSX4O60224 RNU7-12P-201ENST00000516030 62 ntBASIC1.42□□□□□ -2.18
SSX4O60224 RNU7-115P-201ENST00000516433 55 ntBASIC1.42□□□□□ -2.18
SSX4O60224 RNU6-1116P-201ENST00000517269 99 ntBASIC1.42□□□□□ -2.18
SSX4O60224 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.42□□□□□ -2.18
SSX4O60224 AL512598.1-201ENST00000610158 273 ntBASIC1.42□□□□□ -2.18
SSX4O60224 RNU6-1109P-201ENST00000391187 107 ntBASIC1.41□□□□□ -2.18
SSX4O60224 RNU6-321P-201ENST00000410912 106 ntBASIC1.41□□□□□ -2.18
SSX4O60224 MTND5P22-201ENST00000458380 195 ntBASIC1.41□□□□□ -2.18
SSX4O60224 RNU2-31P-201ENST00000516954 155 ntBASIC1.41□□□□□ -2.18
SSX4O60224 Y_RNA.720-201ENST00000517166 92 ntBASIC1.41□□□□□ -2.18
SSX4O60224 RNU6-902P-201ENST00000517212 91 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms