Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
RRP9O43818 MIR3668-201ENST00000582138 75 ntBASIC2.05□□□□□ -2.08
RRP9O43818 AL929325.1-201ENST00000603096 117 ntBASIC2.05□□□□□ -2.08
RRP9O43818 AL033523.1-201ENST00000605153 153 ntBASIC2.05□□□□□ -2.08
RRP9O43818 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RRP9O43818 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RRP9O43818 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
RRP9O43818 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RRP9O43818 SNORA1B-201ENST00000362535 133 ntBASIC2.04□□□□□ -2.08
RRP9O43818 RNU6-653P-201ENST00000363074 106 ntBASIC2.04□□□□□ -2.08
RRP9O43818 Y_RNA.274-201ENST00000364714 101 ntBASIC2.04□□□□□ -2.08
RRP9O43818 Y_RNA.297-201ENST00000364950 91 ntBASIC2.04□□□□□ -2.08
RRP9O43818 RNU4-17P-201ENST00000365598 141 ntBASIC2.04□□□□□ -2.08
RRP9O43818 RNU6-1080P-201ENST00000383982 107 ntBASIC2.04□□□□□ -2.08
RRP9O43818 Y_RNA.510-201ENST00000384511 114 ntBASIC2.04□□□□□ -2.08
RRP9O43818 RNU6-296P-201ENST00000384608 107 ntBASIC2.04□□□□□ -2.08
RRP9O43818 RNU6-950P-201ENST00000384651 107 ntBASIC2.04□□□□□ -2.08
RRP9O43818 RNA5SP100-201ENST00000410903 110 ntBASIC2.04□□□□□ -2.08
RRP9O43818 RNA5SP59-201ENST00000410922 110 ntBASIC2.04□□□□□ -2.08
RRP9O43818 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.04□□□□□ -2.08
RRP9O43818 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.04□□□□□ -2.08
RRP9O43818 RNA5SP320-201ENST00000516263 124 ntBASIC2.04□□□□□ -2.08
RRP9O43818 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.04□□□□□ -2.08
RRP9O43818 RNA5SP437-201ENST00000517249 129 ntBASIC2.04□□□□□ -2.08
RRP9O43818 MIR5688-201ENST00000580619 83 ntBASIC2.04□□□□□ -2.08
RRP9O43818 MIR3162-201ENST00000581818 82 ntBASIC2.04□□□□□ -2.08
RRP9O43818 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.04□□□□□ -2.08
RRP9O43818 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.04□□□□□ -2.08
RRP9O43818 CTSLP2-204ENST00000629029 392 ntBASIC2.04□□□□□ -2.08
RRP9O43818 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RRP9O43818 RNA5SP276-201ENST00000362580 94 ntBASIC2.03□□□□□ -2.08
RRP9O43818 Y_RNA.203-201ENST00000364106 102 ntBASIC2.03□□□□□ -2.08
RRP9O43818 RN7SKP51-201ENST00000410781 304 ntBASIC2.03□□□□□ -2.08
RRP9O43818 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
RRP9O43818 RNA5SP57-201ENST00000459463 123 ntBASIC2.03□□□□□ -2.08
RRP9O43818 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.08
RRP9O43818 Y_RNA.700-201ENST00000516806 100 ntBASIC2.03□□□□□ -2.08
RRP9O43818 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.03□□□□□ -2.08
RRP9O43818 MIR4285-201ENST00000581001 85 ntBASIC2.03□□□□□ -2.08
RRP9O43818 Z83818.1-201ENST00000603584 150 ntBASIC2.03□□□□□ -2.08
RRP9O43818 MIR8054-201ENST00000620877 86 ntBASIC2.03□□□□□ -2.08
RRP9O43818 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
RRP9O43818 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.03□□□□□ -2.08
RRP9O43818 RNU4-10P-201ENST00000364383 140 ntBASIC2.02□□□□□ -2.09
RRP9O43818 Y_RNA.308-201ENST00000365043 101 ntBASIC2.02□□□□□ -2.09
RRP9O43818 MIR626-201ENST00000385032 94 ntBASIC2.02□□□□□ -2.09
RRP9O43818 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.02□□□□□ -2.09
RRP9O43818 AL049830.1-201ENST00000468034 425 ntBASIC2.02□□□□□ -2.09
RRP9O43818 RNA5SP24-201ENST00000516478 95 ntBASIC2.02□□□□□ -2.09
RRP9O43818 RNA5SP481-201ENST00000516814 122 ntBASIC2.02□□□□□ -2.09
RRP9O43818 MIR2681-201ENST00000581814 105 ntBASIC2.02□□□□□ -2.09
RRP9O43818 Y_RNA.265-201ENST00000364677 108 ntBASIC2.01□□□□□ -2.09
RRP9O43818 RNU6-440P-201ENST00000390882 105 ntBASIC2.01□□□□□ -2.09
RRP9O43818 RNU6-493P-201ENST00000391321 108 ntBASIC2.01□□□□□ -2.09
RRP9O43818 RNU6-383P-201ENST00000410864 94 ntBASIC2.01□□□□□ -2.09
RRP9O43818 AL138752.1-201ENST00000452964 351 ntBASIC2.01□□□□□ -2.09
RRP9O43818 SCARNA16.3-201ENST00000516595 184 ntBASIC2.01□□□□□ -2.09
RRP9O43818 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.01□□□□□ -2.09
RRP9O43818 AC021269.2-201ENST00000532318 330 ntBASIC2.01□□□□□ -2.09
RRP9O43818 JPX_2.1-201ENST00000614161 69 ntBASIC2.01□□□□□ -2.09
RRP9O43818 MIR6817-201ENST00000615588 66 ntBASIC2.01□□□□□ -2.09
RRP9O43818 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.01□□□□□ -2.09
RRP9O43818 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.01□□□□□ -2.09
RRP9O43818 WWP1P1-201ENST00000466609 2769 ntBASIC2.01□□□□□ -2.09
RRP9O43818 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RRP9O43818 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
RRP9O43818 Y_RNA.24-201ENST00000362508 103 ntBASIC2□□□□□ -2.09
RRP9O43818 RNU4-41P-201ENST00000364426 143 ntBASIC2□□□□□ -2.09
RRP9O43818 Y_RNA.253-201ENST00000364562 112 ntBASIC2□□□□□ -2.09
RRP9O43818 RNU6-923P-201ENST00000364753 107 ntBASIC2□□□□□ -2.09
RRP9O43818 RNU6-969P-201ENST00000383900 105 ntBASIC2□□□□□ -2.09
RRP9O43818 Y_RNA.500-201ENST00000384466 111 ntBASIC2□□□□□ -2.09
RRP9O43818 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
RRP9O43818 RN7SKP200-201ENST00000410564 320 ntBASIC2□□□□□ -2.09
RRP9O43818 AC009310.1-201ENST00000414414 451 ntBASIC2□□□□□ -2.09
RRP9O43818 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2□□□□□ -2.09
RRP9O43818 HSPE1P9-201ENST00000440046 311 ntBASIC2□□□□□ -2.09
RRP9O43818 Y_RNA.644-201ENST00000459006 113 ntBASIC2□□□□□ -2.09
RRP9O43818 RNY3P16-201ENST00000516338 101 ntBASIC2□□□□□ -2.09
RRP9O43818 Y_RNA.674-201ENST00000516362 113 ntBASIC2□□□□□ -2.09
RRP9O43818 RNU7-28P-201ENST00000516759 62 ntBASIC2□□□□□ -2.09
RRP9O43818 SNORA31.17-201ENST00000516953 127 ntBASIC2□□□□□ -2.09
RRP9O43818 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RRP9O43818 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2□□□□□ -2.09
RRP9O43818 SNORA28-201ENST00000606769 126 ntBASIC2□□□□□ -2.09
RRP9O43818 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2□□□□□ -2.09
RRP9O43818 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
RRP9O43818 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.99□□□□□ -2.09
RRP9O43818 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.99□□□□□ -2.09
RRP9O43818 RNU6-1020P-201ENST00000363684 107 ntBASIC1.99□□□□□ -2.09
RRP9O43818 SNORA4.2-201ENST00000365313 147 ntBASIC1.99□□□□□ -2.09
RRP9O43818 Y_RNA.785-201ENST00000384290 109 ntBASIC1.99□□□□□ -2.09
RRP9O43818 RNA5SP482-201ENST00000391269 118 ntBASIC1.99□□□□□ -2.09
RRP9O43818 Y_RNA.793-201ENST00000411222 111 ntBASIC1.99□□□□□ -2.09
RRP9O43818 COX6CP10-201ENST00000416832 224 ntBASIC1.99□□□□□ -2.09
RRP9O43818 STAG3L5P-204ENST00000443759 179 ntBASIC1.99□□□□□ -2.09
RRP9O43818 RNU1-98P-201ENST00000458992 160 ntBASIC1.99□□□□□ -2.09
RRP9O43818 HMGN1P7-201ENST00000491722 313 ntBASIC1.99□□□□□ -2.09
RRP9O43818 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.99□□□□□ -2.09
RRP9O43818 SNORA31.10-201ENST00000516482 106 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms