Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SNX2P2-201ENST00000424553 323 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 AC024067.1-201ENST00000426199 223 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 MTND1P14-201ENST00000427400 950 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1□□□□□ -2.25
TRAF3IP2O43734 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 RNU6-966P-201ENST00000516479 104 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 RNU6-1291P-201ENST00000516591 104 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 RNU6-63P-201ENST00000516690 95 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.721-201ENST00000517207 102 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 RNU6-988P-201ENST00000519081 107 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 MIR3937-201ENST00000580135 106 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 AC004832.4-201ENST00000608952 331 ntBASIC1□□□□□ -2.25
TRAF3IP2O43734 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TRAF3IP2O43734 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAF3IP2O43734 MTND4P29-201ENST00000503122 1372 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.329-201ENST00000365209 107 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.331-201ENST00000365267 102 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 RNA5SP259-201ENST00000365541 109 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.456-201ENST00000384232 111 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 RNU6-474P-201ENST00000384243 107 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 RNU6-939P-201ENST00000384634 107 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.645-201ENST00000391229 102 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 MIR548P-201ENST00000408336 84 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 RNA5SP511-201ENST00000410487 115 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 RPS4XP11-201ENST00000446897 772 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 RPL30P7-201ENST00000479312 323 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 AC019176.1-201ENST00000518519 225 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 PART1_1.1-201ENST00000611761 217 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 SNORD3E-202ENST00000627253 216 ntBASIC0.99□□□□□ -2.25
TRAF3IP2O43734 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TRAF3IP2O43734 MIRLET7C-201ENST00000362160 84 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 MIR96-201ENST00000362288 78 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.31-201ENST00000362574 102 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 SNORD81.1-201ENST00000363064 77 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNU4-76P-201ENST00000364509 141 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 U8.5-201ENST00000364528 136 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.368-201ENST00000365547 113 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.380-201ENST00000365663 111 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNU6-1323P-201ENST00000384025 107 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 SNORD116-13-201ENST00000384408 92 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNU6-21P-201ENST00000384710 107 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNU6-308P-201ENST00000390957 107 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNU6-823P-201ENST00000391042 103 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 MIR1252-201ENST00000408861 65 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNU6-130P-201ENST00000411112 103 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RPS20P10-201ENST00000451209 253 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 AL049830.1-201ENST00000468034 425 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNA5SP168-201ENST00000516642 112 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNU7-110P-201ENST00000516891 62 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.711-201ENST00000516993 102 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.715-201ENST00000517082 110 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAF3IP2O43734 AC005972.2-201ENST00000604690 348 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 SNORD113-5-201ENST00000607261 78 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 AL365434.2-201ENST00000607979 234 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 AL078604.3-201ENST00000615580 211 ntBASIC0.98□□□□□ -2.25
TRAF3IP2O43734 RNU6-199P-201ENST00000362954 107 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.183-201ENST00000363882 113 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.813-201ENST00000364639 102 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 RNU1-93P-201ENST00000364704 169 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 Y_RNA.394-201ENST00000383942 103 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 RNU6-937P-201ENST00000384325 106 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 SNORA72-201ENST00000384339 132 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 RNU6-1105P-201ENST00000384774 107 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 MIR653-201ENST00000385279 96 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 U8.16-201ENST00000391279 133 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 CALM2P4-201ENST00000430810 426 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 CYCTP-201ENST00000504253 315 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 SEPT14P8-201ENST00000508026 178 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 RNU7-116P-201ENST00000516940 62 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 SUMO2P16-201ENST00000519475 264 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 AL512310.8-201ENST00000550183 120 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 MIR4762-201ENST00000585261 75 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 AC124312.5-201ENST00000604451 268 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAF3IP2O43734 AC027279.3-201ENST00000625055 122 ntBASIC0.97□□□□□ -2.25
TRAF3IP2O43734 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.11-201ENST00000362375 109 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.222-201ENST00000364264 102 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 RNU4-41P-201ENST00000364426 143 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.276-201ENST00000364732 109 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.310-201ENST00000365063 113 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 RNU6-1248P-201ENST00000391096 64 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 RNU6-101P-201ENST00000410323 104 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 RNU6-855P-201ENST00000410395 104 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 MTCO2P12-201ENST00000427426 682 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 AC233266.1-201ENST00000454518 96 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 COX6CP14-201ENST00000469580 174 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 HMGN1P10-201ENST00000474557 553 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 AC092991.1-201ENST00000477176 376 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAF3IP2O43734 AC011604.1-201ENST00000545978 196 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 AC136932.1-201ENST00000574771 208 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 DEFB117-201ENST00000602356 141 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 AL513534.2-201ENST00000603836 250 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 AC242852.1-201ENST00000612151 96 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms