Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL365265.1-201ENST00000621045 234 ntBASIC1.89□□□□□ -2.11
LDB2O43679 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LDB2O43679 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LDB2O43679 RNU6-1205P-201ENST00000363625 106 ntBASIC1.88□□□□□ -2.11
LDB2O43679 Y_RNA.262-201ENST00000364641 102 ntBASIC1.88□□□□□ -2.11
LDB2O43679 Y_RNA.297-201ENST00000364950 91 ntBASIC1.88□□□□□ -2.11
LDB2O43679 RNU6-144P-201ENST00000383951 107 ntBASIC1.88□□□□□ -2.11
LDB2O43679 RNU6-136P-201ENST00000384663 107 ntBASIC1.88□□□□□ -2.11
LDB2O43679 MIR520G-201ENST00000385064 90 ntBASIC1.88□□□□□ -2.11
LDB2O43679 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
LDB2O43679 AC024405.2-202ENST00000532731 184 ntBASIC1.88□□□□□ -2.11
LDB2O43679 AC127455.1-201ENST00000565496 145 ntBASIC1.88□□□□□ -2.11
LDB2O43679 AC069114.2-201ENST00000604699 304 ntBASIC1.88□□□□□ -2.11
LDB2O43679 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LDB2O43679 AC018630.2-201ENST00000534866 2403 ntBASIC1.87□□□□□ -2.11
LDB2O43679 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LDB2O43679 SNORA72-201ENST00000384339 132 ntBASIC1.87□□□□□ -2.11
LDB2O43679 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
LDB2O43679 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
LDB2O43679 RPS4XP11-201ENST00000446897 772 ntBASIC1.87□□□□□ -2.11
LDB2O43679 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
LDB2O43679 RNU7-94P-201ENST00000459576 63 ntBASIC1.87□□□□□ -2.11
LDB2O43679 AC091021.1-201ENST00000468051 388 ntBASIC1.87□□□□□ -2.11
LDB2O43679 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.87□□□□□ -2.11
LDB2O43679 MIR514B-201ENST00000516774 80 ntBASIC1.87□□□□□ -2.11
LDB2O43679 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.87□□□□□ -2.11
LDB2O43679 Z83818.1-201ENST00000603584 150 ntBASIC1.87□□□□□ -2.11
LDB2O43679 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.87□□□□□ -2.11
LDB2O43679 AL353997.5-201ENST00000618886 171 ntBASIC1.87□□□□□ -2.11
LDB2O43679 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.87□□□□□ -2.11
LDB2O43679 AC245060.5-201ENST00000610778 3293 ntBASIC1.86□□□□□ -2.11
LDB2O43679 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
LDB2O43679 RNU6-653P-201ENST00000363074 106 ntBASIC1.86□□□□□ -2.11
LDB2O43679 Y_RNA.293-201ENST00000364908 93 ntBASIC1.86□□□□□ -2.11
LDB2O43679 Y_RNA.785-201ENST00000384290 109 ntBASIC1.86□□□□□ -2.11
LDB2O43679 MIR562-201ENST00000384894 95 ntBASIC1.86□□□□□ -2.11
LDB2O43679 SNORA48.1-201ENST00000390879 135 ntBASIC1.86□□□□□ -2.11
LDB2O43679 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.86□□□□□ -2.11
LDB2O43679 SNORA36B-201ENST00000410438 131 ntBASIC1.86□□□□□ -2.11
LDB2O43679 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
LDB2O43679 MTND2P29-201ENST00000438595 412 ntBASIC1.86□□□□□ -2.11
LDB2O43679 AL138752.1-201ENST00000452964 351 ntBASIC1.86□□□□□ -2.11
LDB2O43679 AL163195.1-201ENST00000496941 348 ntBASIC1.86□□□□□ -2.11
LDB2O43679 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.86□□□□□ -2.11
LDB2O43679 RNU6-1096P-201ENST00000517089 102 ntBASIC1.86□□□□□ -2.11
LDB2O43679 AC100767.1-201ENST00000528178 123 ntBASIC1.86□□□□□ -2.11
LDB2O43679 MIR5094-201ENST00000578766 85 ntBASIC1.86□□□□□ -2.11
LDB2O43679 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
LDB2O43679 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.86□□□□□ -2.11
LDB2O43679 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
LDB2O43679 AC091178.2-201ENST00000584401 117 ntBASIC1.86□□□□□ -2.11
LDB2O43679 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
LDB2O43679 MIR6079-201ENST00000635807 62 ntBASIC1.86□□□□□ -2.11
LDB2O43679 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
LDB2O43679 AC100821.1-201ENST00000523153 2479 ntBASIC1.85□□□□□ -2.11
LDB2O43679 RNU6-1019P-201ENST00000364424 107 ntBASIC1.85□□□□□ -2.11
LDB2O43679 MIR526A2-201ENST00000390198 65 ntBASIC1.85□□□□□ -2.11
LDB2O43679 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
LDB2O43679 RNA5SP450-201ENST00000411206 102 ntBASIC1.85□□□□□ -2.11
LDB2O43679 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
LDB2O43679 Y_RNA.644-201ENST00000459006 113 ntBASIC1.85□□□□□ -2.11
LDB2O43679 RPL23AP54-201ENST00000495129 419 ntBASIC1.85□□□□□ -2.11
LDB2O43679 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
LDB2O43679 Y_RNA.674-201ENST00000516362 113 ntBASIC1.85□□□□□ -2.11
LDB2O43679 RNU6-341P-201ENST00000516973 96 ntBASIC1.85□□□□□ -2.11
LDB2O43679 SNORA81.3-201ENST00000517283 198 ntBASIC1.85□□□□□ -2.11
LDB2O43679 AC011604.1-201ENST00000545978 196 ntBASIC1.85□□□□□ -2.11
LDB2O43679 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
LDB2O43679 MIR5688-201ENST00000580619 83 ntBASIC1.85□□□□□ -2.11
LDB2O43679 Y_RNA.802-201ENST00000614892 130 ntBASIC1.85□□□□□ -2.11
LDB2O43679 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LDB2O43679 AC068700.1-201ENST00000565862 3754 ntBASIC1.85□□□□□ -2.11
LDB2O43679 AC008555.8-201ENST00000623602 2168 ntBASIC1.84□□□□□ -2.11
LDB2O43679 Y_RNA.29-201ENST00000362570 113 ntBASIC1.84□□□□□ -2.11
LDB2O43679 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
LDB2O43679 Y_RNA.308-201ENST00000365043 101 ntBASIC1.84□□□□□ -2.11
LDB2O43679 SNORA8.3-201ENST00000384679 139 ntBASIC1.84□□□□□ -2.11
LDB2O43679 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
LDB2O43679 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
LDB2O43679 AC245047.4-201ENST00000433189 144 ntBASIC1.84□□□□□ -2.11
LDB2O43679 AC069257.2-201ENST00000441819 155 ntBASIC1.84□□□□□ -2.11
LDB2O43679 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
LDB2O43679 RNU6-437P-201ENST00000459408 95 ntBASIC1.84□□□□□ -2.11
LDB2O43679 RPS29P11-201ENST00000496507 171 ntBASIC1.84□□□□□ -2.11
LDB2O43679 RPL23AP63-201ENST00000498752 471 ntBASIC1.84□□□□□ -2.11
LDB2O43679 RNVU1-2-201ENST00000516326 135 ntBASIC1.84□□□□□ -2.11
LDB2O43679 CBX3P4-201ENST00000538909 354 ntBASIC1.84□□□□□ -2.11
LDB2O43679 AC084364.2-201ENST00000546924 395 ntBASIC1.84□□□□□ -2.11
LDB2O43679 MIR6845-201ENST00000613182 61 ntBASIC1.84□□□□□ -2.11
LDB2O43679 U1.36-201ENST00000620684 176 ntBASIC1.84□□□□□ -2.11
LDB2O43679 MIR367-201ENST00000362299 68 ntBASIC1.83□□□□□ -2.12
LDB2O43679 RNU6-1020P-201ENST00000363684 107 ntBASIC1.83□□□□□ -2.12
LDB2O43679 RNU6-674P-201ENST00000363831 107 ntBASIC1.83□□□□□ -2.12
LDB2O43679 RNU4-17P-201ENST00000365598 141 ntBASIC1.83□□□□□ -2.12
LDB2O43679 MIR626-201ENST00000385032 94 ntBASIC1.83□□□□□ -2.12
LDB2O43679 SNORA26.9-201ENST00000391322 122 ntBASIC1.83□□□□□ -2.12
LDB2O43679 AL512604.1-201ENST00000404812 257 ntBASIC1.83□□□□□ -2.12
LDB2O43679 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
LDB2O43679 Y_RNA.793-201ENST00000411222 111 ntBASIC1.83□□□□□ -2.12
LDB2O43679 RNU2-64P-201ENST00000411315 191 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms