Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 Y_RNA.622-201ENST00000411091 108 ntBASIC2.28□□□□□ -2.04
PROM1O43490 RPS15AP28-201ENST00000435088 386 ntBASIC2.28□□□□□ -2.04
PROM1O43490 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.28□□□□□ -2.04
PROM1O43490 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.28□□□□□ -2.04
PROM1O43490 RNU6-561P-201ENST00000516222 102 ntBASIC2.28□□□□□ -2.04
PROM1O43490 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.28□□□□□ -2.04
PROM1O43490 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.28□□□□□ -2.04
PROM1O43490 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
PROM1O43490 AL929325.1-201ENST00000603096 117 ntBASIC2.28□□□□□ -2.04
PROM1O43490 AC073413.2-201ENST00000604332 360 ntBASIC2.28□□□□□ -2.04
PROM1O43490 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
PROM1O43490 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PROM1O43490 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PROM1O43490 SNORD114-6-201ENST00000364393 72 ntBASIC2.27□□□□□ -2.05
PROM1O43490 Y_RNA.587-201ENST00000391210 103 ntBASIC2.27□□□□□ -2.05
PROM1O43490 MIR1262-201ENST00000408276 93 ntBASIC2.27□□□□□ -2.05
PROM1O43490 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.27□□□□□ -2.05
PROM1O43490 AC026436.1-201ENST00000510537 270 ntBASIC2.27□□□□□ -2.05
PROM1O43490 SNORD116-25-201ENST00000516517 92 ntBASIC2.27□□□□□ -2.05
PROM1O43490 RNU2-19P-201ENST00000517288 84 ntBASIC2.27□□□□□ -2.05
PROM1O43490 NDUFA5P6-201ENST00000542110 379 ntBASIC2.27□□□□□ -2.05
PROM1O43490 AC011604.1-201ENST00000545978 196 ntBASIC2.27□□□□□ -2.05
PROM1O43490 AC007229.1-201ENST00000590455 412 ntBASIC2.27□□□□□ -2.05
PROM1O43490 AL031274.2-201ENST00000599419 203 ntBASIC2.27□□□□□ -2.05
PROM1O43490 AP001485.1-201ENST00000604799 199 ntBASIC2.27□□□□□ -2.05
PROM1O43490 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
PROM1O43490 MIR6840-201ENST00000611937 71 ntBASIC2.27□□□□□ -2.05
PROM1O43490 MIR1291-201ENST00000627649 87 ntBASIC2.27□□□□□ -2.05
PROM1O43490 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.27□□□□□ -2.05
PROM1O43490 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.27□□□□□ -2.05
PROM1O43490 AC132825.6-201ENST00000638861 357 ntBASIC2.27□□□□□ -2.05
PROM1O43490 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PROM1O43490 MIR21-201ENST00000362134 72 ntBASIC2.26□□□□□ -2.05
PROM1O43490 RNA5SP289-201ENST00000362332 137 ntBASIC2.26□□□□□ -2.05
PROM1O43490 RNU6-674P-201ENST00000363831 107 ntBASIC2.26□□□□□ -2.05
PROM1O43490 Y_RNA.343-201ENST00000365354 112 ntBASIC2.26□□□□□ -2.05
PROM1O43490 Y_RNA.400-201ENST00000383963 111 ntBASIC2.26□□□□□ -2.05
PROM1O43490 Y_RNA.488-201ENST00000384403 102 ntBASIC2.26□□□□□ -2.05
PROM1O43490 RNA5SP323-201ENST00000391094 133 ntBASIC2.26□□□□□ -2.05
PROM1O43490 RNA5SP467-201ENST00000391274 118 ntBASIC2.26□□□□□ -2.05
PROM1O43490 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.26□□□□□ -2.05
PROM1O43490 RNU4-53P-201ENST00000410828 140 ntBASIC2.26□□□□□ -2.05
PROM1O43490 AC233266.1-201ENST00000454518 96 ntBASIC2.26□□□□□ -2.05
PROM1O43490 snoU13.23-201ENST00000458863 104 ntBASIC2.26□□□□□ -2.05
PROM1O43490 AC055731.1-201ENST00000474387 401 ntBASIC2.26□□□□□ -2.05
PROM1O43490 RNU6-1096P-201ENST00000517089 102 ntBASIC2.26□□□□□ -2.05
PROM1O43490 AL049861.1-201ENST00000603130 150 ntBASIC2.26□□□□□ -2.05
PROM1O43490 AC242852.1-201ENST00000612151 96 ntBASIC2.26□□□□□ -2.05
PROM1O43490 Y_RNA.778-201ENST00000620203 90 ntBASIC2.26□□□□□ -2.05
PROM1O43490 AC244015.1-201ENST00000622301 99 ntBASIC2.26□□□□□ -2.05
PROM1O43490 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
PROM1O43490 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PROM1O43490 Y_RNA.203-201ENST00000364106 102 ntBASIC2.25□□□□□ -2.05
PROM1O43490 RNU6-704P-201ENST00000364162 103 ntBASIC2.25□□□□□ -2.05
PROM1O43490 RNU6-643P-201ENST00000384018 107 ntBASIC2.25□□□□□ -2.05
PROM1O43490 RNA5SP425-201ENST00000410336 112 ntBASIC2.25□□□□□ -2.05
PROM1O43490 ATP5J2P3-201ENST00000451550 258 ntBASIC2.25□□□□□ -2.05
PROM1O43490 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.25□□□□□ -2.05
PROM1O43490 IGKV3-31-201ENST00000523109 329 ntBASIC2.25□□□□□ -2.05
PROM1O43490 RPL23AP91-201ENST00000569211 455 ntBASIC2.25□□□□□ -2.05
PROM1O43490 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
PROM1O43490 AL359075.3-201ENST00000613288 217 ntBASIC2.25□□□□□ -2.05
PROM1O43490 MIR338-201ENST00000636369 67 ntBASIC2.25□□□□□ -2.05
PROM1O43490 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.25□□□□□ -2.05
PROM1O43490 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
PROM1O43490 RNU6-199P-201ENST00000362954 107 ntBASIC2.24□□□□□ -2.05
PROM1O43490 Y_RNA.215-201ENST00000364204 112 ntBASIC2.24□□□□□ -2.05
PROM1O43490 RNU6-818P-201ENST00000364837 108 ntBASIC2.24□□□□□ -2.05
PROM1O43490 RNU4-11P-201ENST00000365287 132 ntBASIC2.24□□□□□ -2.05
PROM1O43490 Y_RNA.337-201ENST00000365312 102 ntBASIC2.24□□□□□ -2.05
PROM1O43490 Y_RNA.521-201ENST00000384560 114 ntBASIC2.24□□□□□ -2.05
PROM1O43490 SNORD37.2-201ENST00000391075 66 ntBASIC2.24□□□□□ -2.05
PROM1O43490 RNA5SP496-201ENST00000391240 109 ntBASIC2.24□□□□□ -2.05
PROM1O43490 SNORA79-201ENST00000408376 140 ntBASIC2.24□□□□□ -2.05
PROM1O43490 AL606753.1-201ENST00000427435 87 ntBASIC2.24□□□□□ -2.05
PROM1O43490 AL353689.1-201ENST00000438895 199 ntBASIC2.24□□□□□ -2.05
PROM1O43490 AC245102.2-201ENST00000448956 180 ntBASIC2.24□□□□□ -2.05
PROM1O43490 AC023449.1-201ENST00000454464 154 ntBASIC2.24□□□□□ -2.05
PROM1O43490 RNU7-99P-201ENST00000516271 62 ntBASIC2.24□□□□□ -2.05
PROM1O43490 RNU1-142P-201ENST00000516682 145 ntBASIC2.24□□□□□ -2.05
PROM1O43490 AC015712.3-201ENST00000559380 164 ntBASIC2.24□□□□□ -2.05
PROM1O43490 MIR4648-201ENST00000580107 72 ntBASIC2.24□□□□□ -2.05
PROM1O43490 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
PROM1O43490 AC046143.2-201ENST00000609789 160 ntBASIC2.24□□□□□ -2.05
PROM1O43490 AC091895.1-201ENST00000624494 256 ntBASIC2.24□□□□□ -2.05
PROM1O43490 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PROM1O43490 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PROM1O43490 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PROM1O43490 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
PROM1O43490 RNU6-23P-201ENST00000363283 107 ntBASIC2.23□□□□□ -2.05
PROM1O43490 SNORD45.3-201ENST00000363836 72 ntBASIC2.23□□□□□ -2.05
PROM1O43490 RNU1-96P-201ENST00000364163 162 ntBASIC2.23□□□□□ -2.05
PROM1O43490 Y_RNA.267-201ENST00000364679 109 ntBASIC2.23□□□□□ -2.05
PROM1O43490 RNU6-1080P-201ENST00000383982 107 ntBASIC2.23□□□□□ -2.05
PROM1O43490 RNY3P5-201ENST00000384127 102 ntBASIC2.23□□□□□ -2.05
PROM1O43490 Y_RNA.497-201ENST00000384447 98 ntBASIC2.23□□□□□ -2.05
PROM1O43490 MIR520G-201ENST00000385064 90 ntBASIC2.23□□□□□ -2.05
PROM1O43490 HMGN2P39-201ENST00000398005 273 ntBASIC2.23□□□□□ -2.05
PROM1O43490 RN7SKP101-201ENST00000411376 320 ntBASIC2.23□□□□□ -2.05
PROM1O43490 RNU1-131P-201ENST00000458943 161 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms