Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC006441.5-201ENST00000612680 209 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 RNU6-136P-201ENST00000384663 107 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 SNORA75.4-201ENST00000391278 119 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 AL359672.1-201ENST00000442302 409 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.4□□□□□ -2.63
CHD1O14646 SNORA25.17-201ENST00000517184 124 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.4□□□□□ -2.63
CHD1O14646 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.4□□□□□ -2.63
CHD1O14646 MTND4P33-201ENST00000556706 766 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.4□□□□□ -2.63
CHD1O14646 uc_338.19-201ENST00000616808 99 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 AC139792.3-201ENST00000623525 224 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.41□□□□□ -2.64
CHD1O14646 SNORA1.2-201ENST00000365189 134 ntBASIC-1.41□□□□□ -2.64
CHD1O14646 snoU13.16-201ENST00000459350 104 ntBASIC-1.41□□□□□ -2.64
CHD1O14646 AC069113.1-201ENST00000517763 267 ntBASIC-1.41□□□□□ -2.64
CHD1O14646 BNIP3P39-201ENST00000601077 554 ntBASIC-1.41□□□□□ -2.64
CHD1O14646 RNU6-179P-201ENST00000363350 107 ntBASIC-1.42□□□□□ -2.64
CHD1O14646 RNU6-726P-201ENST00000364680 107 ntBASIC-1.42□□□□□ -2.64
CHD1O14646 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
CHD1O14646 RNU6-847P-201ENST00000411115 108 ntBASIC-1.42□□□□□ -2.64
CHD1O14646 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.42□□□□□ -2.64
CHD1O14646 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.42□□□□□ -2.64
CHD1O14646 snoU13.2-201ENST00000459201 104 ntBASIC-1.42□□□□□ -2.64
CHD1O14646 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.42□□□□□ -2.64
CHD1O14646 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.42□□□□□ -2.64
CHD1O14646 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.42□□□□□ -2.64
CHD1O14646 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.42□□□□□ -2.64
CHD1O14646 SNORA70.25-201ENST00000612741 95 ntBASIC-1.42□□□□□ -2.64
CHD1O14646 SNORD50B-201ENST00000364995 70 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 MIR516B1-201ENST00000385211 90 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 RNU2-8P-201ENST00000410727 190 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.43□□□□□ -2.64
CHD1O14646 MTCO2P29-201ENST00000465212 189 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.43□□□□□ -2.64
CHD1O14646 MTND3P13-201ENST00000574391 343 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 uc_338.11-201ENST00000619132 160 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 AC073869.9-201ENST00000641610 120 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 RNU6-280P-201ENST00000364145 104 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 SNORD93-201ENST00000408813 74 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 RPL22P17-201ENST00000438729 315 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 UQCRBP2-201ENST00000447827 297 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 MTND1P5-201ENST00000517906 940 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.43□□□□□ -2.64
CHD1O14646 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.43□□□□□ -2.64
CHD1O14646 POLR3GP1-201ENST00000594073 261 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 AF250324.2-201ENST00000608299 610 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 AC131235.4-201ENST00000609288 620 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 AC127459.3-201ENST00000624328 466 ntBASIC-1.43□□□□□ -2.64
CHD1O14646 RNU6-324P-201ENST00000363957 106 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 SNORA20B-201ENST00000384220 132 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 RNU6-393P-201ENST00000384475 107 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 RNU6-880P-201ENST00000384526 107 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 MIR876-201ENST00000401147 81 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 MRPL42P2-201ENST00000403169 426 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.44□□□□□ -2.64
CHD1O14646 RNA5SP169-201ENST00000517268 117 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 AL157687.1-201ENST00000554853 619 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 AC005609.4-201ENST00000625071 447 ntBASIC-1.44□□□□□ -2.64
CHD1O14646 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.45□□□□□ -2.64
CHD1O14646 SNORA40.2-201ENST00000390847 128 ntBASIC-1.45□□□□□ -2.64
CHD1O14646 RNU6-475P-201ENST00000516073 104 ntBASIC-1.45□□□□□ -2.64
CHD1O14646 AC069431.2-201ENST00000604149 1099 ntBASIC-1.45□□□□□ -2.64
CHD1O14646 MIR6740-201ENST00000618268 113 ntBASIC-1.45□□□□□ -2.64
CHD1O14646 U6.114-201ENST00000636407 96 ntBASIC-1.45□□□□□ -2.64
CHD1O14646 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 SNORD115-8-201ENST00000363856 82 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 RNU6-621P-201ENST00000364752 109 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 SNORD115-38-201ENST00000365037 82 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 RNU6-47P-201ENST00000383866 107 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 SNORA22B-201ENST00000383876 138 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 RNU6-535P-201ENST00000384722 107 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.46□□□□□ -2.64
CHD1O14646 AL138752.1-201ENST00000452964 351 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 AC138207.3-201ENST00000585289 166 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 AC010332.2-201ENST00000613083 1904 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 U8.6-201ENST00000364939 135 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 SSR1P2-201ENST00000415208 787 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 MTND2P32-201ENST00000521584 1038 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 MIR4307-201ENST00000582802 84 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 RMST_3.1-201ENST00000611651 109 ntBASIC-1.46□□□□□ -2.64
CHD1O14646 SNORA27.1-201ENST00000362604 124 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 RNY1P12-201ENST00000364251 105 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 RNU6-224P-201ENST00000384055 107 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 MIR522-201ENST00000385071 87 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 MT-TF-201ENST00000387314 71 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 RNU6-131P-201ENST00000391144 107 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 MTCO2P11-201ENST00000431069 680 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms