Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU6-769P-201ENST00000384407 104 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
CACNA1AO00555 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 HIF1AP1-201ENST00000553642 175 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RMST_3.1-201ENST00000611651 109 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.37□□□□□ -2.47
CACNA1AO00555 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU6-462P-201ENST00000362659 105 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 SNORD115-7-201ENST00000365306 82 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU6-609P-201ENST00000365459 107 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU6-393P-201ENST00000384475 107 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU6-883P-201ENST00000384597 107 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 MIR1284-201ENST00000408337 120 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU6-847P-201ENST00000411115 108 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.37□□□□□ -2.47
CACNA1AO00555 SNRPGP14-201ENST00000435400 219 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.37□□□□□ -2.47
CACNA1AO00555 AL138752.1-201ENST00000452964 351 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 MTCO3P8-201ENST00000453691 755 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.37□□□□□ -2.47
CACNA1AO00555 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 SNORA27.4-201ENST00000516650 95 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.37□□□□□ -2.47
CACNA1AO00555 MTND4LP25-201ENST00000570218 163 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.37□□□□□ -2.47
CACNA1AO00555 AC245297.2-201ENST00000610119 565 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 AC078880.5-201ENST00000617845 421 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 AC006435.5-201ENST00000624486 112 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNU6-855P-201ENST00000410395 104 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC244250.2-201ENST00000418731 148 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 BX276092.1-201ENST00000427368 251 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 MTCO2P11-201ENST00000431069 680 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 SUMO1P2-201ENST00000452524 304 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 ZNF114P1-201ENST00000453500 292 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNU6-830P-201ENST00000516353 107 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNA5SP66-201ENST00000517178 101 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 MIR4762-201ENST00000585261 75 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC138207.3-201ENST00000585289 166 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC125232.2-201ENST00000592457 143 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC134878.1-201ENST00000619901 243 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC091304.10-201ENST00000641554 121 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 MIR148A-201ENST00000362215 68 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 SNORA1.2-201ENST00000365189 134 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNU6-116P-201ENST00000384042 109 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 MT-TY-201ENST00000387409 66 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNA5SP494-201ENST00000410653 129 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNU6-274P-201ENST00000459566 107 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC010587.1-201ENST00000505809 469 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC116562.3-201ENST00000506136 177 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC079140.5-201ENST00000507882 310 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNU6-469P-201ENST00000516253 101 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 SNORD45.4-201ENST00000516629 73 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC134698.4-201ENST00000523451 826 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AP002802.2-201ENST00000605877 235 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 AC002044.1-201ENST00000606707 158 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 U7.6-201ENST00000610841 64 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 MIR6507-201ENST00000613630 70 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 SCARNA4-201ENST00000629045 128 ntBASIC-0.38□□□□□ -2.47
CACNA1AO00555 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.38□□□□□ -2.47
CACNA1AO00555 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 SNORD56.2-201ENST00000363242 71 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 RNU6-792P-201ENST00000363490 107 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 SNORA25.7-201ENST00000364375 127 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 SNORA22B-201ENST00000383876 138 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 MIR204-201ENST00000385200 110 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 SNORD28B-201ENST00000390993 75 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AL136310.1-201ENST00000404926 654 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC006210.1-201ENST00000424882 111 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AL359672.1-201ENST00000442302 409 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 RNU6-612P-201ENST00000516909 102 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC026421.1-201ENST00000519101 163 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC104576.1-201ENST00000524225 88 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 MIR3684-201ENST00000579779 74 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 MIR6082-201ENST00000613604 109 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC022306.2-201ENST00000617563 647 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 ZNF299P-201ENST00000406845 1804 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 MIR655-201ENST00000362159 97 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 RNU6-727P-201ENST00000363592 107 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms