Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MIRLET7C-201ENST00000362160 84 ntBASIC1.31□□□□□ -2.2
RTCAO00442 Y_RNA.152-201ENST00000363578 100 ntBASIC1.31□□□□□ -2.2
RTCAO00442 Y_RNA.214-201ENST00000364201 112 ntBASIC1.31□□□□□ -2.2
RTCAO00442 SNORA72-201ENST00000384339 132 ntBASIC1.31□□□□□ -2.2
RTCAO00442 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.31□□□□□ -2.2
RTCAO00442 AC108667.1-201ENST00000428618 249 ntBASIC1.31□□□□□ -2.2
RTCAO00442 HSPE1P25-201ENST00000455484 251 ntBASIC1.31□□□□□ -2.2
RTCAO00442 AL049830.1-201ENST00000468034 425 ntBASIC1.31□□□□□ -2.2
RTCAO00442 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.31□□□□□ -2.2
RTCAO00442 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
RTCAO00442 RNU7-116P-201ENST00000516940 62 ntBASIC1.31□□□□□ -2.2
RTCAO00442 AL442663.2-201ENST00000554385 511 ntBASIC1.31□□□□□ -2.2
RTCAO00442 DEFB117-201ENST00000602356 141 ntBASIC1.31□□□□□ -2.2
RTCAO00442 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
RTCAO00442 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
RTCAO00442 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
RTCAO00442 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
RTCAO00442 RNA5SP327-201ENST00000362494 101 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNU4-90P-201ENST00000362773 141 ntBASIC1.3□□□□□ -2.2
RTCAO00442 SNORD113-8-201ENST00000363497 74 ntBASIC1.3□□□□□ -2.2
RTCAO00442 Y_RNA.153-201ENST00000363615 91 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNU6-770P-201ENST00000363929 105 ntBASIC1.3□□□□□ -2.2
RTCAO00442 Y_RNA.265-201ENST00000364677 108 ntBASIC1.3□□□□□ -2.2
RTCAO00442 Y_RNA.267-201ENST00000364679 109 ntBASIC1.3□□□□□ -2.2
RTCAO00442 Y_RNA.286-201ENST00000364813 102 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNA5SP259-201ENST00000365541 109 ntBASIC1.3□□□□□ -2.2
RTCAO00442 Y_RNA.383-201ENST00000383855 97 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNU4-30P-201ENST00000410245 143 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNU6-855P-201ENST00000410395 104 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNU6-121P-201ENST00000410525 99 ntBASIC1.3□□□□□ -2.2
RTCAO00442 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.3□□□□□ -2.2
RTCAO00442 STAG3L5P-204ENST00000443759 179 ntBASIC1.3□□□□□ -2.2
RTCAO00442 MTND4LP30-201ENST00000454092 297 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNU6-1291P-201ENST00000516591 104 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
RTCAO00442 RNU6-1137P-201ENST00000517073 99 ntBASIC1.3□□□□□ -2.2
RTCAO00442 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.3□□□□□ -2.2
RTCAO00442 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
RTCAO00442 Y_RNA.140-201ENST00000363474 103 ntBASIC1.29□□□□□ -2.2
RTCAO00442 Y_RNA.326-201ENST00000365176 113 ntBASIC1.29□□□□□ -2.2
RTCAO00442 Y_RNA.341-201ENST00000365341 102 ntBASIC1.29□□□□□ -2.2
RTCAO00442 Y_RNA.527-201ENST00000384573 102 ntBASIC1.29□□□□□ -2.2
RTCAO00442 ELOCP20-201ENST00000422460 345 ntBASIC1.29□□□□□ -2.2
RTCAO00442 POLR2KP2-201ENST00000438155 177 ntBASIC1.29□□□□□ -2.2
RTCAO00442 Z98949.2-201ENST00000440996 144 ntBASIC1.29□□□□□ -2.2
RTCAO00442 RPL39P38-201ENST00000467018 153 ntBASIC1.29□□□□□ -2.2
RTCAO00442 RNU6-397P-201ENST00000516226 104 ntBASIC1.29□□□□□ -2.2
RTCAO00442 RNU6-764P-201ENST00000516396 105 ntBASIC1.29□□□□□ -2.2
RTCAO00442 RNA5SP168-201ENST00000516642 112 ntBASIC1.29□□□□□ -2.2
RTCAO00442 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.29□□□□□ -2.2
RTCAO00442 AC136628.3-201ENST00000521868 290 ntBASIC1.29□□□□□ -2.2
RTCAO00442 AC131281.1-201ENST00000522984 164 ntBASIC1.29□□□□□ -2.2
RTCAO00442 AC011604.1-201ENST00000545978 196 ntBASIC1.29□□□□□ -2.2
RTCAO00442 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.29□□□□□ -2.2
RTCAO00442 AP003357.1-201ENST00000604497 148 ntBASIC1.29□□□□□ -2.2
RTCAO00442 AC027279.3-201ENST00000625055 122 ntBASIC1.29□□□□□ -2.2
RTCAO00442 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.29□□□□□ -2.2
RTCAO00442 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
RTCAO00442 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RTCAO00442 Y_RNA.105-201ENST00000363182 111 ntBASIC1.28□□□□□ -2.2
RTCAO00442 RNU4-41P-201ENST00000364426 143 ntBASIC1.28□□□□□ -2.2
RTCAO00442 Y_RNA.418-201ENST00000384029 102 ntBASIC1.28□□□□□ -2.2
RTCAO00442 LINC01399-202ENST00000458450 244 ntBASIC1.28□□□□□ -2.2
RTCAO00442 RNU6-1153P-201ENST00000516760 105 ntBASIC1.28□□□□□ -2.2
RTCAO00442 SNORA40.15-201ENST00000516884 107 ntBASIC1.28□□□□□ -2.2
RTCAO00442 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RTCAO00442 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.28□□□□□ -2.2
RTCAO00442 RNU6-290P-201ENST00000365212 101 ntBASIC1.27□□□□□ -2.21
RTCAO00442 RNU6-102P-201ENST00000384485 104 ntBASIC1.27□□□□□ -2.21
RTCAO00442 RNU6-136P-201ENST00000384663 107 ntBASIC1.27□□□□□ -2.21
RTCAO00442 RNU6-1105P-201ENST00000384774 107 ntBASIC1.27□□□□□ -2.21
RTCAO00442 MIR653-201ENST00000385279 96 ntBASIC1.27□□□□□ -2.21
RTCAO00442 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.27□□□□□ -2.21
RTCAO00442 AL731563.1-201ENST00000442202 214 ntBASIC1.27□□□□□ -2.21
RTCAO00442 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
RTCAO00442 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
RTCAO00442 RPS23P4-201ENST00000487908 423 ntBASIC1.27□□□□□ -2.21
RTCAO00442 SNORD116-28-201ENST00000516123 91 ntBASIC1.27□□□□□ -2.21
RTCAO00442 RNU6-191P-201ENST00000516295 94 ntBASIC1.27□□□□□ -2.21
RTCAO00442 RNU7-115P-201ENST00000516433 55 ntBASIC1.27□□□□□ -2.21
RTCAO00442 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.27□□□□□ -2.21
RTCAO00442 HSPE1P19-201ENST00000603327 295 ntBASIC1.27□□□□□ -2.21
RTCAO00442 SNORD3E-202ENST00000627253 216 ntBASIC1.27□□□□□ -2.21
RTCAO00442 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
RTCAO00442 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
RTCAO00442 snoU2_19.2-201ENST00000363024 80 ntBASIC1.26□□□□□ -2.21
RTCAO00442 RNU6-833P-201ENST00000363486 107 ntBASIC1.26□□□□□ -2.21
RTCAO00442 RNU1-124P-201ENST00000363861 145 ntBASIC1.26□□□□□ -2.21
RTCAO00442 RNU6-326P-201ENST00000365480 107 ntBASIC1.26□□□□□ -2.21
RTCAO00442 RNU6-969P-201ENST00000383900 105 ntBASIC1.26□□□□□ -2.21
RTCAO00442 U8.16-201ENST00000391279 133 ntBASIC1.26□□□□□ -2.21
RTCAO00442 AL590004.1-201ENST00000405321 300 ntBASIC1.26□□□□□ -2.21
RTCAO00442 CALM2P4-201ENST00000430810 426 ntBASIC1.26□□□□□ -2.21
RTCAO00442 AC104332.1-201ENST00000440471 797 ntBASIC1.26□□□□□ -2.21
RTCAO00442 AC233266.1-201ENST00000454518 96 ntBASIC1.26□□□□□ -2.21
RTCAO00442 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
RTCAO00442 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
RTCAO00442 RNA5SP404-201ENST00000517118 132 ntBASIC1.26□□□□□ -2.21
RTCAO00442 AC127455.1-201ENST00000565496 145 ntBASIC1.26□□□□□ -2.21
RTCAO00442 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms