Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC055731.1-201ENST00000474387 401 ntBASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 MIR5094-201ENST00000578766 85 ntBASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 AC022217.4-201ENST00000604389 163 ntBASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 BX248123.2-201ENST00000606318 124 ntBASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 Y_RNA.121-201ENST00000363309 113 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 Y_RNA.308-201ENST00000365043 101 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 SNORD23.1-201ENST00000408212 104 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 RN7SKP164-201ENST00000516138 266 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 AP002004.2-201ENST00000531656 154 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 AC072026.1-201ENST00000605023 201 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 AL021707.8-201ENST00000609428 183 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 FTX_2.1-201ENST00000618816 94 ntBASIC2.66□□□□□ -1.98
CCDC85CA6NKD9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC85CA6NKD9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 MIR367-201ENST00000362299 68 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 RNU6-457P-201ENST00000363999 107 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 RNU6-47P-201ENST00000383866 107 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 RNU6-969P-201ENST00000383900 105 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 SNORA46-201ENST00000384762 135 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 RN7SKP101-201ENST00000411376 320 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 RN7SL75P-201ENST00000461926 281 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 RNY3P16-201ENST00000516338 101 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 AL929325.1-201ENST00000603096 117 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 AC012640.5-201ENST00000623897 319 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.65□□□□□ -1.99
CCDC85CA6NKD9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 Y_RNA.203-201ENST00000364106 102 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 RNA5SP496-201ENST00000391240 109 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 RPL21P3-201ENST00000395517 478 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 AL023284.1-201ENST00000403956 276 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 MIR1278-201ENST00000408753 81 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 AL451074.5-201ENST00000415894 435 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 COX6CP10-201ENST00000416832 224 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 RNA5SP220-201ENST00000516298 104 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 AP002392.1-201ENST00000537692 208 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 MIR2681-201ENST00000581814 105 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 AL391903.3-201ENST00000612158 163 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 MIR6504-201ENST00000613520 61 ntBASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CCDC85CA6NKD9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 Y_RNA.7-201ENST00000362352 102 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 RNU6-103P-201ENST00000363686 107 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 snoU2_19.4-201ENST00000364329 80 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 RNU6-923P-201ENST00000364753 107 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 MIR616-201ENST00000385293 97 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 RNU6-493P-201ENST00000391321 108 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 MTND5P15-201ENST00000434246 349 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 AL606517.2-201ENST00000442855 241 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 MIR1291-201ENST00000627649 87 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 AC095038.3-201ENST00000634439 195 ntBASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC85CA6NKD9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 AC092881.1-201ENST00000638218 2733 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 RNU6-112P-201ENST00000363599 104 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 RNU4-10P-201ENST00000364383 140 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 Y_RNA.233-201ENST00000364407 101 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 RNU6-296P-201ENST00000384608 107 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 Y_RNA.555-201ENST00000384673 110 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 Y_RNA.571-201ENST00000384753 98 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 MIR548I3-201ENST00000408378 149 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 MIR548I1-201ENST00000408810 149 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 RPS29P6-201ENST00000438196 145 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 RNU6-1291P-201ENST00000516591 104 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 RMST_2.1-201ENST00000617263 136 ntBASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CCDC85CA6NKD9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 AC093831.2-201ENST00000624393 3427 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 Y_RNA.24-201ENST00000362508 103 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 SNORA1B-201ENST00000362535 133 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 Y_RNA.229-201ENST00000364347 113 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 MIR520A-201ENST00000384862 85 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 MT-TR-201ENST00000387439 65 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 MIR1276-201ENST00000408707 83 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 AP1B1P2-201ENST00000416196 106 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 PIGPP3-201ENST00000425307 415 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 AC245047.3-201ENST00000429428 127 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 AC008555.8-201ENST00000623602 2168 ntBASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CCDC85CA6NKD9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC85CA6NKD9 RNY3P5-201ENST00000384127 102 ntBASIC2.6□□□□□ -1.99
CCDC85CA6NKD9 RNA5SP109-201ENST00000391010 116 ntBASIC2.6□□□□□ -1.99
CCDC85CA6NKD9 SNORA40.18-201ENST00000391200 128 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms