Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 PIGPP3-201ENST00000425307 415 ntBASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 MTCYBP6-201ENST00000441810 138 ntBASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 AC092991.1-201ENST00000477176 376 ntBASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 AC117454.1-201ENST00000491120 168 ntBASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 AP003072.1-201ENST00000531740 145 ntBASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 AL513423.1-201ENST00000621695 132 ntBASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
NKX6-3A6NJ46 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 AC134026.1-201ENST00000623249 2239 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.64-201ENST00000362845 102 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.140-201ENST00000363474 103 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 RNU4-76P-201ENST00000364509 141 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.380-201ENST00000365663 111 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 AC117470.1-201ENST00000381974 330 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 RNU6-639P-201ENST00000384074 107 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 RNU6-424P-201ENST00000384367 105 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 MIR215-201ENST00000384858 110 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 AC113618.1-201ENST00000416747 285 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 RPL21P38-201ENST00000418090 167 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 SNX2P2-201ENST00000424553 323 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 AC027119.1-201ENST00000440877 241 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 RNU6-764P-201ENST00000516396 105 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 RNU6-922P-201ENST00000516753 99 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 MIR4303-201ENST00000581299 66 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 AL591926.4-201ENST00000616895 298 ntBASIC1.27□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.153-201ENST00000363615 91 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 RNU6-770P-201ENST00000363929 105 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.310-201ENST00000365063 113 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.418-201ENST00000384029 102 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 RNU6-1065P-201ENST00000384513 106 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 SNORD115-46-201ENST00000390982 71 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 HSPE1P25-201ENST00000455484 251 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 LINC01399-202ENST00000458450 244 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 MRPS35P2-201ENST00000508242 191 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 RNA5SP445-201ENST00000515889 115 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 RNU6-496P-201ENST00000516145 99 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 RNU7-28P-201ENST00000516759 62 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 POLR3GP1-201ENST00000594073 261 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
NKX6-3A6NJ46 U8.7-201ENST00000364940 136 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.368-201ENST00000365547 113 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 RNU6-163P-201ENST00000384396 106 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.569-201ENST00000384749 103 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 RNU2-14P-201ENST00000411053 191 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 AC104332.1-201ENST00000440471 797 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 DYNLT3P2-201ENST00000442517 295 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 MTND5P22-201ENST00000458380 195 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 HMGN1P10-201ENST00000474557 553 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 RPL23AP54-201ENST00000495129 419 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 AC024405.2-202ENST00000532731 184 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 AL355297.3-201ENST00000604082 446 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 AL078604.3-201ENST00000615580 211 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 AL121890.5-201ENST00000620848 304 ntBASIC1.25□□□□□ -2.21
NKX6-3A6NJ46 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 MIRLET7C-201ENST00000362160 84 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 RNU4-90P-201ENST00000362773 141 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 RNU6-694P-201ENST00000364071 147 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.253-201ENST00000364562 112 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.456-201ENST00000384232 111 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 AL354695.1-201ENST00000427935 228 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 RNU6-902P-201ENST00000517212 91 ntBASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NKX6-3A6NJ46 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 SNORD33-201ENST00000362761 85 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 RNU6-199P-201ENST00000362954 107 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 snoU2_19.2-201ENST00000363024 80 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 RNU1-42P-201ENST00000364033 160 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 RNU6-60P-201ENST00000364792 103 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 SNORA72-201ENST00000384339 132 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 Y_RNA.541-201ENST00000384640 113 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 RNU6-1105P-201ENST00000384774 107 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 MTCO2P33-201ENST00000402100 465 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 RNU6-985P-201ENST00000410182 104 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 BTF3P4-201ENST00000418852 495 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 MTATP8P1-201ENST00000467115 207 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 AC114811.1-201ENST00000507207 168 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 RNU6-191P-201ENST00000516295 94 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 AL358944.1-201ENST00000528537 144 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 CYP3A52P-201ENST00000563326 91 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 MIR4498-201ENST00000577599 66 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 AL645939.4-201ENST00000604495 135 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
NKX6-3A6NJ46 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms