Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC008555.8-201ENST00000623602 2168 ntBASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC163A0A0D9SF12 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC163A0A0D9SF12 AL596028.1-201ENST00000326971 197 ntBASIC2.53□□□□□ -2
CCDC163A0A0D9SF12 RNU6-674P-201ENST00000363831 107 ntBASIC2.53□□□□□ -2
CCDC163A0A0D9SF12 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
CCDC163A0A0D9SF12 RPS27AP9-201ENST00000477681 438 ntBASIC2.53□□□□□ -2
CCDC163A0A0D9SF12 SCARNA8-201ENST00000515924 131 ntBASIC2.53□□□□□ -2
CCDC163A0A0D9SF12 AP002004.2-201ENST00000531656 154 ntBASIC2.53□□□□□ -2
CCDC163A0A0D9SF12 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC163A0A0D9SF12 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 ZNF702P-202ENST00000434269 1966 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 SNORD68-201ENST00000363214 84 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-1209P-201ENST00000363655 107 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-209P-201ENST00000384118 107 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-440P-201ENST00000390882 105 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-482P-201ENST00000391068 107 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 AL606845.1-201ENST00000404881 255 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 AC069257.2-201ENST00000441819 155 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 AP004217.1-201ENST00000480579 346 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 Y_RNA.662-201ENST00000516028 97 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-1219P-201ENST00000516143 112 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 AC015712.3-201ENST00000559380 164 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 MIR5688-201ENST00000580619 83 ntBASIC2.52□□□□□ -2.01
CCDC163A0A0D9SF12 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 MIR126-201ENST00000362291 85 ntBASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 MIR520A-201ENST00000384862 85 ntBASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 Y_RNA.622-201ENST00000411091 108 ntBASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 SNRPGP10-201ENST00000432323 225 ntBASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 HMGN1P7-201ENST00000491722 313 ntBASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 MIR4744-201ENST00000581563 82 ntBASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 MIR8054-201ENST00000620877 86 ntBASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 AC092881.1-201ENST00000638218 2733 ntBASIC2.51□□□□□ -2.01
CCDC163A0A0D9SF12 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-682P-201ENST00000363843 106 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 Y_RNA.796-201ENST00000364268 102 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 Y_RNA.799-201ENST00000364992 102 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 MIR616-201ENST00000385293 97 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 SNORA12.1-201ENST00000390873 148 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 RPS29P6-201ENST00000438196 145 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 STAG3L5P-204ENST00000443759 179 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 AL121914.1-201ENST00000450188 156 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 RPS27P21-201ENST00000486977 252 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 AC074198.2-201ENST00000508153 258 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 AC234781.5-201ENST00000508429 271 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 AL591926.4-201ENST00000616895 298 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 FTX_2.1-201ENST00000618816 94 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 U6.106-201ENST00000636360 105 ntBASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC163A0A0D9SF12 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-103P-201ENST00000363686 107 ntBASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 Y_RNA.253-201ENST00000364562 112 ntBASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 SNORA4.2-201ENST00000365313 147 ntBASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 RNA5SP496-201ENST00000391240 109 ntBASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 RPS27P1-201ENST00000450552 247 ntBASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 RNA5SP76-201ENST00000516277 87 ntBASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 SUB1P4-201ENST00000566062 339 ntBASIC2.49□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-112P-201ENST00000363599 104 ntBASIC2.48□□□□□ -2.01
CCDC163A0A0D9SF12 RNA5SP456-201ENST00000364002 114 ntBASIC2.48□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-578P-201ENST00000390980 103 ntBASIC2.48□□□□□ -2.01
CCDC163A0A0D9SF12 AL591806.2-201ENST00000433122 173 ntBASIC2.48□□□□□ -2.01
CCDC163A0A0D9SF12 RPL23AP63-201ENST00000498752 471 ntBASIC2.48□□□□□ -2.01
CCDC163A0A0D9SF12 AC108210.2-201ENST00000503681 201 ntBASIC2.48□□□□□ -2.01
CCDC163A0A0D9SF12 AC004486.1-201ENST00000546846 233 ntBASIC2.48□□□□□ -2.01
CCDC163A0A0D9SF12 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-1084P-201ENST00000362498 107 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 SNORD114-1-201ENST00000362705 72 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 Y_RNA.121-201ENST00000363309 113 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 Y_RNA.412-201ENST00000384001 104 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-131P-201ENST00000391144 107 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 RN7SKP200-201ENST00000410564 320 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 AC009310.1-201ENST00000414414 451 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 MTND2P29-201ENST00000438595 412 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 Y_RNA.714-201ENST00000517065 90 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 AL358944.1-201ENST00000528537 144 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 AC103810.6-201ENST00000606708 136 ntBASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CCDC163A0A0D9SF12 RNU6-886P-201ENST00000384319 105 ntBASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 RNU6-1228P-201ENST00000391014 107 ntBASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 HSPE1P9-201ENST00000440046 311 ntBASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 RPL23AP6-201ENST00000446637 472 ntBASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 RNU7-34P-201ENST00000459394 64 ntBASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 RNU6-561P-201ENST00000516222 102 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms