Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR1244-3-201ENST00000635744 85 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR1244-2-201ENST00000636449 85 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR1244-4-202ENST00000636813 85 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-961P-201ENST00000363893 105 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SNORD50B-201ENST00000364995 70 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-601P-201ENST00000384540 107 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR548F5-201ENST00000408421 86 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-329P-201ENST00000459618 107 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RPL7P42-201ENST00000481005 679 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RN7SKP12-201ENST00000516275 143 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.676-201ENST00000516393 96 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR2355-201ENST00000517199 87 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC018638.8-201ENST00000588755 281 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC092794.2-201ENST00000620933 563 ntBASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.27□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.148-201ENST00000363557 117 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.172-201ENST00000363765 102 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-324P-201ENST00000363957 106 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SNORA50A-201ENST00000384225 134 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-613P-201ENST00000410412 108 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SNRPGP10-201ENST00000432323 225 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC105313.1-201ENST00000509121 353 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SNORA68.3-201ENST00000515906 83 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNA5SP220-201ENST00000516298 104 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.714-201ENST00000517065 90 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC012433.1-201ENST00000588916 398 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.101-201ENST00000363154 102 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.368-201ENST00000365547 113 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-926P-201ENST00000384075 107 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SNORD28B-201ENST00000390993 75 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR548K-201ENST00000408406 116 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU2-54P-201ENST00000410299 190 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU2-61P-201ENST00000411069 191 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-177P-201ENST00000411257 104 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 CHEK2P4-201ENST00000450340 246 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MTND3P10-201ENST00000450967 341 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 U8.19-201ENST00000459095 133 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR2053-201ENST00000459295 91 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RPL17P19-201ENST00000489069 552 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-496P-201ENST00000516145 99 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR2115-201ENST00000516657 100 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC005899.2-201ENST00000584353 90 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC104695.3-201ENST00000604052 296 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC005972.2-201ENST00000604690 348 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC240442.1-201ENST00000616055 283 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC048344.4-201ENST00000619744 527 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC091925.1-201ENST00000623204 462 ntBASIC0.25□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.404-201ENST00000383978 102 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SNORA72-201ENST00000384339 132 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR936-201ENST00000401264 98 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC107399.1-201ENST00000451226 265 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RPS29P25-201ENST00000481709 171 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC093534.1-201ENST00000504977 132 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-307P-201ENST00000516743 106 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR548AR-201ENST00000582191 57 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 PISRT1.1-201ENST00000616930 107 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AL442644.1-201ENST00000454390 3105 ntBASIC0.24□□□□□ -2.37
IGHV3-43A0A0B4J1X8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.168-201ENST00000363740 102 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SNORD14E-201ENST00000364009 85 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.226-201ENST00000364337 114 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU4-24P-201ENST00000364565 139 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-99P-201ENST00000364721 107 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.370-201ENST00000365589 108 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.453-201ENST00000384223 109 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 SNORD38C-201ENST00000384381 69 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR573-201ENST00000384964 99 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-510P-201ENST00000391239 108 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR1287-201ENST00000408492 90 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MTND4P28-201ENST00000426217 387 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC011352.1-201ENST00000512300 793 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-155P-201ENST00000516347 100 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR4711-201ENST00000578274 70 ntBASIC0.23□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIRLET7D-201ENST00000362263 87 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-396P-201ENST00000365369 105 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 Y_RNA.482-201ENST00000384377 111 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 MIR570-201ENST00000384917 97 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNA5SP193-201ENST00000410353 107 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 FCF1P4-201ENST00000448326 183 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RNU6-1012P-201ENST00000516606 109 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AL355375.2-201ENST00000574825 175 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 AC005176.2-201ENST00000596933 147 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 RMST_2.1-201ENST00000617263 136 ntBASIC0.22□□□□□ -2.37
IGHV3-43A0A0B4J1X8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 242.2 ms