Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
COL4A3BPQ9Y5P4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU6-1309P-201ENST00000363305 108 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU6-1105P-201ENST00000384774 107 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 RPL30P13-201ENST00000418873 348 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 AL118496.2-201ENST00000448300 230 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 SERF1AP1-201ENST00000514575 187 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU6-1338P-201ENST00000516328 91 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 POLR3GP1-201ENST00000594073 261 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 AP003357.1-201ENST00000604497 148 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR548AY-201ENST00000617669 107 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 AL513423.1-201ENST00000621695 132 ntBASIC2.24□□□□□ -2.05
COL4A3BPQ9Y5P4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 SNORA72.4-201ENST00000384174 132 ntBASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 Y_RNA.461-201ENST00000384263 103 ntBASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR1302-3-201ENST00000408128 138 ntBASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR3124-201ENST00000582636 67 ntBASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 AL078604.3-201ENST00000615580 211 ntBASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR7843-201ENST00000622274 79 ntBASIC2.23□□□□□ -2.05
COL4A3BPQ9Y5P4 ZNF355P-201ENST00000427301 3216 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 MIR424-201ENST00000362227 98 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 Y_RNA.47-201ENST00000362697 108 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 Y_RNA.376-201ENST00000365638 108 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 AL135790.2-201ENST00000437701 267 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 AC104332.1-201ENST00000440471 797 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 AC099513.1-201ENST00000490423 301 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 AC091959.1-201ENST00000495857 238 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 RNU7-115P-201ENST00000516433 55 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 SNORA77B-201ENST00000578179 125 ntBASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A3BPQ9Y5P4 RNA5SP138-201ENST00000365098 114 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU6-203P-201ENST00000384038 104 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR934-201ENST00000401241 83 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 AC004965.1-201ENST00000413033 213 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 AL161935.2-201ENST00000414627 60 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 ICE2P2-201ENST00000483823 2787 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 MTCO2P24-201ENST00000515611 426 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 DEFB108E-201ENST00000524692 240 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 AC024405.2-202ENST00000532731 184 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 AC127455.1-201ENST00000565496 145 ntBASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
COL4A3BPQ9Y5P4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU6-899P-201ENST00000363947 107 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 Y_RNA.512-201ENST00000384518 102 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 Y_RNA.556-201ENST00000384677 113 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR194-1-201ENST00000384892 85 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 RPL23AP54-201ENST00000495129 419 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 OR9P1P-201ENST00000496431 281 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 SNORA27.4-201ENST00000516650 95 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
COL4A3BPQ9Y5P4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 AL391987.6-201ENST00000305671 199 ntBASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR335-201ENST00000362173 94 ntBASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 SNORD33-201ENST00000362761 85 ntBASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU7-141P-201ENST00000459304 62 ntBASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 AC117454.1-201ENST00000491120 168 ntBASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 SCARNA24.2-201ENST00000516968 130 ntBASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU6-801P-201ENST00000364087 105 ntBASIC2.18□□□□□ -2.06
COL4A3BPQ9Y5P4 U8.7-201ENST00000364940 136 ntBASIC2.18□□□□□ -2.06
COL4A3BPQ9Y5P4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL4A3BPQ9Y5P4 MTCYBP9-201ENST00000431021 303 ntBASIC2.18□□□□□ -2.06
COL4A3BPQ9Y5P4 HSPE1P24-201ENST00000450782 238 ntBASIC2.18□□□□□ -2.06
COL4A3BPQ9Y5P4 AP001282.2-201ENST00000616149 309 ntBASIC2.18□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR8063-201ENST00000621930 81 ntBASIC2.18□□□□□ -2.06
COL4A3BPQ9Y5P4 SNORD3E-202ENST00000627253 216 ntBASIC2.18□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU6-1272P-201ENST00000362776 107 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 Y_RNA.133-201ENST00000363428 110 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU4-41P-201ENST00000364426 143 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR513A1-201ENST00000385138 129 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR660-201ENST00000385235 97 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 U8.13-201ENST00000390842 128 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 SNORA12.1-201ENST00000390873 148 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 AC005908.1-201ENST00000468701 347 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 AL161670.1-201ENST00000554348 137 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 AC095038.3-201ENST00000634439 195 ntBASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
COL4A3BPQ9Y5P4 UBE2WP1-201ENST00000362030 340 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 SNORD68-201ENST00000363214 84 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms