Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 AC117454.1-201ENST00000491120 168 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-341P-201ENST00000516973 96 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 RNA5SP437-201ENST00000517249 129 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 AC012433.1-201ENST00000588916 398 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 POLR3GP1-201ENST00000594073 261 ntBASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-801P-201ENST00000364087 105 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-950P-201ENST00000384651 107 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 AL135790.2-201ENST00000437701 267 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 RPS4XP11-201ENST00000446897 772 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 RNU7-34P-201ENST00000459394 64 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 RPL39P38-201ENST00000467018 153 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 AC062037.2-201ENST00000610137 73 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CLDN16Q9Y5I7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.193-201ENST00000363979 102 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 U8.7-201ENST00000364940 136 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 SNORA4.2-201ENST00000365313 147 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 SNORA72.4-201ENST00000384174 132 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 U8.13-201ENST00000390842 128 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-763P-201ENST00000390865 106 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-440P-201ENST00000390882 105 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 AC009310.1-201ENST00000414414 451 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 BTF3P11-201ENST00000426582 477 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 RPS27P1-201ENST00000450552 247 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 RPL23AP54-201ENST00000495129 419 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 RNU7-116P-201ENST00000516940 62 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 AC011604.1-201ENST00000545978 196 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 MIR4709-201ENST00000577272 72 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 MIR3198-2-201ENST00000577868 80 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 AC091178.2-201ENST00000584401 117 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 U2.14-201ENST00000615943 113 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 MIR8054-201ENST00000620877 86 ntBASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.81□□□□□ -2.12
CLDN16Q9Y5I7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.14-201ENST00000362415 103 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-1323P-201ENST00000384025 107 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.477-201ENST00000384352 108 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-1289P-201ENST00000384431 106 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 SNORA26.5-201ENST00000391215 123 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 MIR548H3-201ENST00000408771 118 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 RN7SKP200-201ENST00000410564 320 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 RNU2-14P-201ENST00000411053 191 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 AC104332.1-201ENST00000440471 797 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 snoU13.27-201ENST00000459278 104 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 RNU7-141P-201ENST00000459304 62 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 snoU13.26-201ENST00000459452 105 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 AL049830.1-201ENST00000468034 425 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.668-201ENST00000516233 93 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.679-201ENST00000516416 91 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 AP002004.2-201ENST00000531656 154 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 AC024405.2-202ENST00000532731 184 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 AC004817.2-201ENST00000561794 651 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 AC010900.2-201ENST00000604508 210 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 MIR548AY-201ENST00000617669 107 ntBASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CLDN16Q9Y5I7 SNORA1B-201ENST00000362535 133 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-1272P-201ENST00000362776 107 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.117-201ENST00000363294 101 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-899P-201ENST00000363947 107 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.275-201ENST00000364726 110 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-740P-201ENST00000364734 105 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 SNORA72-201ENST00000384339 132 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 AL603910.2-201ENST00000407268 136 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 STAG3L5P-204ENST00000443759 179 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 U8.19-201ENST00000459095 133 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 RNU7-115P-201ENST00000516433 55 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 AC110588.1-201ENST00000559699 137 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 AL929325.1-201ENST00000603096 117 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 snoU18.1-201ENST00000629629 71 ntBASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLDN16Q9Y5I7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-414P-201ENST00000363705 104 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 SNORD27-201ENST00000363981 72 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.277-201ENST00000364754 102 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 RNA5SP138-201ENST00000365098 114 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 Y_RNA.350-201ENST00000365409 98 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 RNU6-360P-201ENST00000390944 104 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 RNU1-40P-201ENST00000516816 164 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms