Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 U6.73-201ENST00000619194 103 ntBASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 RNU1-22P-201ENST00000363334 158 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 Y_RNA.172-201ENST00000363765 102 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-144P-201ENST00000383951 107 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 RNU11-5P-201ENST00000391216 129 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 RNA5SP247-201ENST00000411181 105 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 AC104332.1-201ENST00000440471 797 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 RNU7-141P-201ENST00000459304 62 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 RNU7-116P-201ENST00000516940 62 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 RNU7-172P-201ENST00000517125 64 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 AP002392.1-201ENST00000537692 208 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 AC005972.2-201ENST00000604690 348 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 AL353149.1-201ENST00000610667 244 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 AC068647.2-201ENST00000637380 353 ntBASIC2.29□□□□□ -2.04
SSX2IPQ9Y2D8 AC134026.1-201ENST00000623249 2239 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-653P-201ENST00000363074 106 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-1048P-201ENST00000364054 107 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-117P-201ENST00000365415 107 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-1323P-201ENST00000384025 107 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 SNORA67.3-201ENST00000384366 140 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-417P-201ENST00000384712 107 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 MIR17-201ENST00000385012 84 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 AL445646.1-201ENST00000431784 216 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 RNA5SP233-201ENST00000459153 113 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 AC097462.1-201ENST00000514125 324 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-1041P-201ENST00000516254 102 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 AC004832.4-201ENST00000608952 331 ntBASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-1205P-201ENST00000363625 106 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 RNU4-13P-201ENST00000364019 141 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 RNA5SP493-201ENST00000364115 91 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 RNU1-96P-201ENST00000364163 162 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 U8.7-201ENST00000364940 136 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 Y_RNA.308-201ENST00000365043 101 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 SNORD116-13-201ENST00000384408 92 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 AC019129.1-201ENST00000403786 261 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 RNU7-115P-201ENST00000516433 55 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 RNA5SP137-201ENST00000516833 135 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 AC007229.1-201ENST00000590455 412 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 AP003357.1-201ENST00000604497 148 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 AC072026.1-201ENST00000605023 201 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 MIR338-201ENST00000636369 67 ntBASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-23P-201ENST00000363283 107 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-1164P-201ENST00000364428 107 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 Y_RNA.293-201ENST00000364908 93 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-376P-201ENST00000384731 106 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 MIR515-2-201ENST00000384883 83 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 MIR515-1-201ENST00000384884 83 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 RNA5SP511-201ENST00000410487 115 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 AL162725.1-201ENST00000435405 301 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 RNU7-120P-201ENST00000459334 63 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 RNA5SP458-201ENST00000516188 119 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 RNU7-99P-201ENST00000516271 62 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 RNY3P16-201ENST00000516338 101 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-63P-201ENST00000516690 95 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 MIR5688-201ENST00000580619 83 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 POLR3GP1-201ENST00000594073 261 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 AL031274.2-201ENST00000599419 203 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 AL359075.3-201ENST00000613288 217 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 MIR548AY-201ENST00000617669 107 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 FTX_2.1-201ENST00000618816 94 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
SSX2IPQ9Y2D8 Y_RNA.270-201ENST00000364693 104 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-923P-201ENST00000364753 107 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 SNORA8.3-201ENST00000384679 139 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 MIR548I3-201ENST00000408378 149 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 MIR548I1-201ENST00000408810 149 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-1186P-201ENST00000410429 97 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 RNA5SP270-201ENST00000411361 118 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 EBAG9P1-201ENST00000418955 543 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 AC117454.1-201ENST00000491120 168 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 AC100767.1-201ENST00000528178 123 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 AC015720.1-201ENST00000565251 277 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 MIR3169-201ENST00000578032 83 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 AC022202.1-201ENST00000613515 211 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 Y_RNA.802-201ENST00000614892 130 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms