Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SNORD115-39-201ENST00000363694 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-4-201ENST00000363810 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-6-201ENST00000363942 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-42-201ENST00000364273 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-15-201ENST00000364809 81 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-26-201ENST00000365067 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-10-201ENST00000365073 81 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-43-201ENST00000365503 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-36-201ENST00000365629 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 RNA5SP467-201ENST00000391274 118 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-380P-201ENST00000410207 107 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 RPS29P28-201ENST00000446439 141 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 RNU7-45P-201ENST00000459460 63 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 RNU7-2P-201ENST00000516096 62 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 AC090821.2-201ENST00000523552 176 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 AL513043.2-201ENST00000573941 143 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 MIR3152-201ENST00000579801 74 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 OTUD4P1-201ENST00000237841 3067 ntBASIC4.59□□□□□ -1.68
TRIM35Q9UPQ4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 AC008163.1-202ENST00000636004 2889 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 MIR1236-201ENST00000408340 102 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 AC006989.1-201ENST00000427212 131 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 RPL32P34-201ENST00000486380 400 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 RNU6-965P-201ENST00000516721 96 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 RNU6-586P-201ENST00000517265 104 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 MIR4738-201ENST00000579134 87 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 AC008739.3-201ENST00000603262 127 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 MIR92B-201ENST00000607575 96 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 AP003355.3-201ENST00000623465 114 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 AC244205.2-202ENST00000635781 342 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 MIR6841-201ENST00000637129 72 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 U6.108-201ENST00000637764 58 ntBASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM35Q9UPQ4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 RNA5SP502-201ENST00000362694 119 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 MIR218-2-201ENST00000385006 110 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 AC123900.1-201ENST00000420390 96 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 RNU1-98P-201ENST00000458992 160 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 RNU6-557P-201ENST00000516842 110 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 IGKV2-26-201ENST00000518305 343 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 AC020914.4-201ENST00000597690 277 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 U3.45-201ENST00000607547 219 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 MIR6076-201ENST00000617521 113 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 AC022149.2-201ENST00000621061 203 ntBASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRIM35Q9UPQ4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 Y_RNA.494-201ENST00000384432 111 ntBASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 RPL23AP48-201ENST00000406913 488 ntBASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 MIR548G-201ENST00000408442 89 ntBASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 RNU7-94P-201ENST00000459576 63 ntBASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 RNU1-142P-201ENST00000516682 145 ntBASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 AP000867.2-201ENST00000532468 320 ntBASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 ICE2P2-201ENST00000483823 2787 ntBASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 MFSD8-233ENST00000641482 4860 ntBASIC4.56□□□□□ -1.68
TRIM35Q9UPQ4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 MIRLET7A1-201ENST00000362295 80 ntBASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 SNORA32-201ENST00000384072 121 ntBASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 RPS29P31-201ENST00000446147 164 ntBASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 RNA5SP112-201ENST00000515937 99 ntBASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 MIR4765-201ENST00000585007 77 ntBASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 AF117829.1-206ENST00000621883 3802 ntBASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM35Q9UPQ4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM35Q9UPQ4 AP001486.2-201ENST00000561652 5113 ntBASIC4.54□□□□□ -1.68
TRIM35Q9UPQ4 SNORA31-201ENST00000362607 130 ntBASIC4.54□□□□□ -1.68
TRIM35Q9UPQ4 RNU6-634P-201ENST00000459134 106 ntBASIC4.54□□□□□ -1.68
TRIM35Q9UPQ4 RNU7-34P-201ENST00000459394 64 ntBASIC4.54□□□□□ -1.68
TRIM35Q9UPQ4 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.54□□□□□ -1.68
TRIM35Q9UPQ4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 RNU6-649P-201ENST00000384463 107 ntBASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 VWA8P1-201ENST00000510889 176 ntBASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 RNU6-90P-201ENST00000606352 106 ntBASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 AC103810.6-201ENST00000606708 136 ntBASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 MIR7975-201ENST00000619350 68 ntBASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM35Q9UPQ4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms