Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
SCAF8Q9UPN6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SCAF8Q9UPN6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 Y_RNA.233-201ENST00000364407 101 ntBASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 SNORA48.3-201ENST00000391081 134 ntBASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 MIR548M-201ENST00000408260 86 ntBASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 U8.19-201ENST00000459095 133 ntBASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 AL137100.2-201ENST00000555786 315 ntBASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 MIR5692C2-201ENST00000577959 77 ntBASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCAF8Q9UPN6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SCAF8Q9UPN6 MIR340-201ENST00000362125 95 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 MIR378A-201ENST00000362177 66 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 RNU6-661P-201ENST00000362409 107 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 RNU6-418P-201ENST00000384035 107 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 SNORA26.5-201ENST00000391215 123 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 RNU4-62P-201ENST00000410125 130 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 RNU6-710P-201ENST00000410424 105 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 RN7SKP51-201ENST00000410781 304 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 RNU4-61P-201ENST00000411243 107 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 snoU13.31-201ENST00000607291 104 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 AL078604.3-201ENST00000615580 211 ntBASIC2.33□□□□□ -2.04
SCAF8Q9UPN6 RNA5SP493-201ENST00000364115 91 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.435-201ENST00000384095 112 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 RNU6-855P-201ENST00000410395 104 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 AC016717.1-201ENST00000448918 286 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 RPS29P11-201ENST00000496507 171 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 RNU6-255P-201ENST00000516957 105 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 RNU6-1212P-201ENST00000517023 104 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 AC005786.1-201ENST00000588553 154 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 U6.106-201ENST00000636360 105 ntBASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.32□□□□□ -2.04
SCAF8Q9UPN6 AC005336.3-201ENST00000623833 2679 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 AC092881.1-201ENST00000638218 2733 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 AC068700.1-201ENST00000565862 3754 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 RNU6-1048P-201ENST00000364054 107 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.240-201ENST00000364469 95 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.341-201ENST00000365341 102 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.368-201ENST00000365547 113 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 SNORA72.4-201ENST00000384174 132 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 AL627390.1-201ENST00000396055 340 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 AL355796.1-201ENST00000406706 323 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 RPS27P21-201ENST00000486977 252 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.662-201ENST00000516028 97 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 SUMO2P18-201ENST00000518873 252 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 MIR3169-201ENST00000578032 83 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 AL353149.1-201ENST00000610667 244 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 AC134026.1-201ENST00000623249 2239 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 AL359851.1-201ENST00000569460 4997 ntBASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SCAF8Q9UPN6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 AL159152.1-201ENST00000635019 2587 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 RNU6-774P-201ENST00000363238 107 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.118-201ENST00000363300 101 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.124-201ENST00000363339 93 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 SNORD114-6-201ENST00000364393 72 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.310-201ENST00000365063 113 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 SNORA20B-201ENST00000384220 132 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.456-201ENST00000384232 111 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 MIR9-3-201ENST00000385084 90 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 RNU2-40P-201ENST00000410833 196 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 RNU6-321P-201ENST00000410912 106 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 RNU6-57P-201ENST00000411348 103 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 SNORA70.12-201ENST00000516084 153 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 RNU6-1219P-201ENST00000516143 112 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 RNU2-19P-201ENST00000517288 84 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 MIR4303-201ENST00000581299 66 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 AC013791.1-201ENST00000616619 62 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 AC006435.5-201ENST00000624486 112 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 AC008555.8-201ENST00000623602 2168 ntBASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.3□□□□□ -2.04
SCAF8Q9UPN6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 SNORD114-7-201ENST00000362520 77 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 Y_RNA.172-201ENST00000363765 102 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 RNU4-52P-201ENST00000384209 138 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 RNU11-3P-201ENST00000391111 133 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 MIR873-201ENST00000401120 77 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 MTCO2P33-201ENST00000402100 465 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 SNORD65B-201ENST00000459126 73 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.29□□□□□ -2.04
SCAF8Q9UPN6 AC005840.1-201ENST00000498412 377 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms