Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 Y_RNA.602-201ENST00000410535 92 ntBASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 RPS27P1-201ENST00000450552 247 ntBASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 RNU6-966P-201ENST00000516479 104 ntBASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 RNU6-295P-201ENST00000516901 104 ntBASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 AL162424.1-201ENST00000602325 221 ntBASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 AC006006.1-201ENST00000603082 144 ntBASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 AC022217.4-201ENST00000604389 163 ntBASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 AP001282.2-201ENST00000616149 309 ntBASIC2.08□□□□□ -2.08
PHTF1Q9UMS5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 RNU6-117P-201ENST00000365415 107 ntBASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 RNU4-30P-201ENST00000410245 143 ntBASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 AL445646.1-201ENST00000431784 216 ntBASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 JTBP1-201ENST00000441314 247 ntBASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 RNU6-1132P-201ENST00000459214 107 ntBASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 RNU7-34P-201ENST00000459394 64 ntBASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 HMGB3P17-201ENST00000504195 649 ntBASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 RNU6-341P-201ENST00000516973 96 ntBASIC2.07□□□□□ -2.08
PHTF1Q9UMS5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 MIR335-201ENST00000362173 94 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 RNU4-90P-201ENST00000362773 141 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.329-201ENST00000365209 107 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.508-201ENST00000384502 114 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 RNU6-1337P-201ENST00000516525 95 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 SNORA28-201ENST00000606769 126 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 MIR8054-201ENST00000620877 86 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.06□□□□□ -2.08
PHTF1Q9UMS5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.16-201ENST00000362421 102 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.562-201ENST00000384695 113 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 RNU6-440P-201ENST00000390882 105 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 RNU6-1248P-201ENST00000391096 64 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 AC019129.1-201ENST00000403786 261 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 AL034345.1-201ENST00000407768 123 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 POLR2KP2-201ENST00000438155 177 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 AC008834.1-201ENST00000511612 175 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 RNU6-1338P-201ENST00000516328 91 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 MIR3671-201ENST00000580455 88 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 MIR4781-201ENST00000585250 76 ntBASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.05□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.14-201ENST00000362415 103 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 RNU4-13P-201ENST00000364019 141 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.237-201ENST00000364439 102 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 SNORA4.2-201ENST00000365313 147 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.466-201ENST00000384294 113 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.618-201ENST00000410949 107 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 AC091021.1-201ENST00000468051 388 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 MTND1P19-201ENST00000511780 315 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 RNU7-28P-201ENST00000516759 62 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 RNU2-56P-201ENST00000516826 190 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 DEFB108E-201ENST00000524692 240 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 AL358944.1-201ENST00000528537 144 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 AP002004.2-201ENST00000531656 154 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 AC091178.2-201ENST00000584401 117 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 AC012433.1-201ENST00000588916 398 ntBASIC2.04□□□□□ -2.08
PHTF1Q9UMS5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 AL391987.6-201ENST00000305671 199 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.307-201ENST00000365022 117 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 RNU6-290P-201ENST00000365212 101 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 RNU6-326P-201ENST00000365480 107 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 RNU6-439P-201ENST00000384188 106 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 AL162725.1-201ENST00000435405 301 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 AC110588.1-201ENST00000559699 137 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
PHTF1Q9UMS5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 RNY1P10-201ENST00000363268 113 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 Y_RNA.188-201ENST00000363952 111 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 Y_RNA.350-201ENST00000365409 98 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 Y_RNA.383-201ENST00000383855 97 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 Y_RNA.447-201ENST00000384184 113 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 Y_RNA.569-201ENST00000384749 103 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 RNU2-38P-201ENST00000410856 79 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 snoU13.9-201ENST00000458927 103 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 Y_RNA.680-201ENST00000516441 93 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 RNU6-1096P-201ENST00000517089 102 ntBASIC2.02□□□□□ -2.09
PHTF1Q9UMS5 AL929325.1-201ENST00000603096 117 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 434.5 ms