Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SNORD58.1-201ENST00000391313 66 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 AC091179.3-201ENST00000474761 144 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 AC074198.2-201ENST00000508153 258 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 SNORA40.9-201ENST00000515895 93 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 MIR5094-201ENST00000578766 85 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 MIR4423-201ENST00000580922 80 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.772-201ENST00000606692 102 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 MIR8074-201ENST00000615081 81 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 AC005562.2-201ENST00000618264 111 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 AC127459.3-201ENST00000624328 466 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 AL159152.1-201ENST00000635019 2587 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 RNU6-774P-201ENST00000363238 107 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.297-201ENST00000364950 91 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 RNU6-290P-201ENST00000365212 101 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 RNU6-47P-201ENST00000383866 107 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 RNU6-296P-201ENST00000384608 107 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 RNU6-541P-201ENST00000384709 110 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.570-201ENST00000384750 101 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 PIGPP3-201ENST00000425307 415 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 SERF1AP1-201ENST00000514575 187 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 RNY3P16-201ENST00000516338 101 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 RNU2-34P-201ENST00000516534 121 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 RNU6-856P-201ENST00000516959 98 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 AK6P2-201ENST00000549020 471 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 MIR4422-201ENST00000581938 83 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 AL157834.3-201ENST00000615543 103 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 U2.14-201ENST00000615943 113 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 AC245060.5-201ENST00000610778 3293 ntBASIC1.61□□□□□ -2.15
CLIP2Q9UDT6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 RNU6-280P-201ENST00000364145 104 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 RNY1-201ENST00000364228 113 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 SNORD87-201ENST00000364849 89 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 RNU6-1175P-201ENST00000365200 107 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.352-201ENST00000365439 102 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 RNA5SP504-201ENST00000410676 117 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 RNU6-1199P-201ENST00000411249 104 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 ELOCP21-201ENST00000412558 336 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 AC007215.1-201ENST00000464893 276 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 RN7SKP49-201ENST00000516675 260 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 AL160236.1-201ENST00000556317 195 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 AC004792.1-201ENST00000614523 137 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 TCL6_2.1-201ENST00000615162 119 ntBASIC1.6□□□□□ -2.15
CLIP2Q9UDT6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 RNU6-545P-201ENST00000362681 104 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.415-201ENST00000384012 112 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 RNU6-662P-201ENST00000384253 104 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 SNORD63-201ENST00000384262 68 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.515-201ENST00000384535 112 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 MIR1283-1-201ENST00000408494 87 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 MIR548H3-201ENST00000408771 118 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 MTCO1P5-201ENST00000433573 344 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 AC099677.2-201ENST00000436385 175 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 SNORA25.14-201ENST00000516481 132 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 RNU7-110P-201ENST00000516891 62 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 RNU6-255P-201ENST00000516957 105 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 MIR2355-201ENST00000517199 87 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 SNORA81.3-201ENST00000517283 198 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 AL353149.1-201ENST00000610667 244 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 FTX_2.1-201ENST00000618816 94 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 AC137590.2-201ENST00000619709 240 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 AL353770.2-201ENST00000620024 78 ntBASIC1.59□□□□□ -2.15
CLIP2Q9UDT6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 MTND5P35-201ENST00000557537 1720 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 RNU4-90P-201ENST00000362773 141 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 SNORD115-8-201ENST00000363856 82 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 RNU6-454P-201ENST00000364292 107 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 SNORD115-38-201ENST00000365037 82 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.478-201ENST00000384358 107 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 AL603908.1-201ENST00000406098 201 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 MIR1298-201ENST00000408783 112 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 AL135790.2-201ENST00000437701 267 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 AC091959.1-201ENST00000495857 238 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 AC024405.2-202ENST00000532731 184 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 AC069114.2-201ENST00000604699 304 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 U6.104-201ENST00000637979 90 ntBASIC1.58□□□□□ -2.16
CLIP2Q9UDT6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.44-201ENST00000362676 108 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 RNU4-80P-201ENST00000363200 141 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms