Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 MIR215-201ENST00000384858 110 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 HSPE1P21-201ENST00000438283 308 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 RPS20P10-201ENST00000451209 253 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 HSPE1P25-201ENST00000455484 251 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 MTATP8P1-201ENST00000467115 207 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AC108729.3-201ENST00000513484 108 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.720-201ENST00000517166 92 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AP003733.2-201ENST00000529409 171 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AP002004.2-201ENST00000531656 154 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AC004832.4-201ENST00000608952 331 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AC021506.2-201ENST00000612354 169 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 MIR8063-201ENST00000621930 81 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 SNORA26.9-201ENST00000391322 122 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 RPS4XP11-201ENST00000446897 772 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AL049830.1-201ENST00000468034 425 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC008737.2-201ENST00000599446 118 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC005972.2-201ENST00000604690 348 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 SNORA28-201ENST00000606769 126 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC068647.2-201ENST00000637380 353 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 RNU6-238P-201ENST00000363313 106 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 MIR1287-201ENST00000408492 90 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 AL731563.1-201ENST00000442202 214 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 HSPE1P24-201ENST00000450782 238 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 HMGN1P10-201ENST00000474557 553 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 RNU6-635P-201ENST00000516651 102 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 MIR4498-201ENST00000577599 66 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 AL162424.1-201ENST00000602325 221 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 ICE2P2-201ENST00000483823 2787 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 RNU6-713P-201ENST00000384761 107 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC107393.1-201ENST00000512403 346 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC011604.1-201ENST00000545978 196 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 SNORA77B-201ENST00000578179 125 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC037487.3-201ENST00000606668 112 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 SNORA63C-201ENST00000364578 129 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 RNU6-290P-201ENST00000365212 101 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 SNORA53-201ENST00000391141 249 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 AC004965.1-201ENST00000413033 213 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 CYCSP49-201ENST00000420810 319 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 AC099513.1-201ENST00000490423 301 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 MIR4719-201ENST00000585233 84 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.145-201ENST00000363527 102 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.459-201ENST00000384251 102 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.512-201ENST00000384518 102 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 RNU6-1109P-201ENST00000391187 107 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 MTND5P22-201ENST00000458380 195 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 RNU7-28P-201ENST00000516759 62 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 RNU6-570P-201ENST00000517051 105 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 SUMO2P16-201ENST00000519475 264 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 AC073349.3-201ENST00000617616 186 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 SNORA25.1-201ENST00000362326 128 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNA5SP259-201ENST00000365541 109 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNU6-514P-201ENST00000384208 107 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 PGBD4P5-201ENST00000445958 426 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 AC117454.1-201ENST00000491120 168 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNU6-191P-201ENST00000516295 94 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNU2-31P-201ENST00000516954 155 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 AL358944.1-201ENST00000528537 144 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms