Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 MIR215-201ENST00000384858 110 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 HSPE1P21-201ENST00000438283 308 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 RPS20P10-201ENST00000451209 253 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 HSPE1P25-201ENST00000455484 251 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 MTATP8P1-201ENST00000467115 207 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AC108729.3-201ENST00000513484 108 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.720-201ENST00000517166 92 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AP003733.2-201ENST00000529409 171 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AP002004.2-201ENST00000531656 154 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AC004832.4-201ENST00000608952 331 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AC021506.2-201ENST00000612354 169 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 MIR8063-201ENST00000621930 81 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 SNORA26.9-201ENST00000391322 122 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 RPS4XP11-201ENST00000446897 772 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AL049830.1-201ENST00000468034 425 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC008737.2-201ENST00000599446 118 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC005972.2-201ENST00000604690 348 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 SNORA28-201ENST00000606769 126 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 AC068647.2-201ENST00000637380 353 ntBASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
HCN3Q9P1Z3 RNU6-238P-201ENST00000363313 106 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 MIR1287-201ENST00000408492 90 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 AL731563.1-201ENST00000442202 214 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 HSPE1P24-201ENST00000450782 238 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 HMGN1P10-201ENST00000474557 553 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 RNU6-635P-201ENST00000516651 102 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 MIR4498-201ENST00000577599 66 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 AL162424.1-201ENST00000602325 221 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
HCN3Q9P1Z3 ICE2P2-201ENST00000483823 2787 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 RNU6-713P-201ENST00000384761 107 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC107393.1-201ENST00000512403 346 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC011604.1-201ENST00000545978 196 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 SNORA77B-201ENST00000578179 125 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 AC037487.3-201ENST00000606668 112 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.71□□□□□ -2.14
HCN3Q9P1Z3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 SNORA63C-201ENST00000364578 129 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 RNU6-290P-201ENST00000365212 101 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 SNORA53-201ENST00000391141 249 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 AC004965.1-201ENST00000413033 213 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 CYCSP49-201ENST00000420810 319 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 AC099513.1-201ENST00000490423 301 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 MIR4719-201ENST00000585233 84 ntBASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.7□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.145-201ENST00000363527 102 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.459-201ENST00000384251 102 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.512-201ENST00000384518 102 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 RNU6-1109P-201ENST00000391187 107 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 MTND5P22-201ENST00000458380 195 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 RNU7-28P-201ENST00000516759 62 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 RNU6-570P-201ENST00000517051 105 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 SUMO2P16-201ENST00000519475 264 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 AC073349.3-201ENST00000617616 186 ntBASIC1.69□□□□□ -2.14
HCN3Q9P1Z3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 SNORA25.1-201ENST00000362326 128 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNA5SP259-201ENST00000365541 109 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNU6-514P-201ENST00000384208 107 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 PGBD4P5-201ENST00000445958 426 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 AC117454.1-201ENST00000491120 168 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNU6-191P-201ENST00000516295 94 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 RNU2-31P-201ENST00000516954 155 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 AL358944.1-201ENST00000528537 144 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms