Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC245047.4-201ENST00000433189 144 ntBASIC2.35□□□□□ -2.03
CCM2LQ9NUG4 AC055731.1-201ENST00000474387 401 ntBASIC2.35□□□□□ -2.03
CCM2LQ9NUG4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.35□□□□□ -2.03
CCM2LQ9NUG4 AP002004.2-201ENST00000531656 154 ntBASIC2.35□□□□□ -2.03
CCM2LQ9NUG4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCM2LQ9NUG4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 RNU6-674P-201ENST00000363831 107 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.308-201ENST00000365043 101 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 SNORA67.4-201ENST00000384688 142 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 RNU6-907P-201ENST00000390924 102 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.793-201ENST00000411222 111 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 AC245047.3-201ENST00000429428 127 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 AC233266.1-201ENST00000454518 96 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.644-201ENST00000459006 113 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 Y_RNA.674-201ENST00000516362 113 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 RNU2-56P-201ENST00000516826 190 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 SNORA81.3-201ENST00000517283 198 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 AC242852.1-201ENST00000612151 96 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 AC244015.1-201ENST00000622301 99 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 AC012640.5-201ENST00000623897 319 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
CCM2LQ9NUG4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCM2LQ9NUG4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
CCM2LQ9NUG4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CCM2LQ9NUG4 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
CCM2LQ9NUG4 MIR520A-201ENST00000384862 85 ntBASIC2.33□□□□□ -2.04
CCM2LQ9NUG4 MTND5P15-201ENST00000434246 349 ntBASIC2.33□□□□□ -2.04
CCM2LQ9NUG4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.33□□□□□ -2.04
CCM2LQ9NUG4 CBX3P4-201ENST00000538909 354 ntBASIC2.33□□□□□ -2.04
CCM2LQ9NUG4 SUB1P4-201ENST00000566062 339 ntBASIC2.33□□□□□ -2.04
CCM2LQ9NUG4 MIR2681-201ENST00000581814 105 ntBASIC2.33□□□□□ -2.04
CCM2LQ9NUG4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCM2LQ9NUG4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 SNORA63D-201ENST00000364359 132 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 RNU6-950P-201ENST00000384651 107 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 MIR144-201ENST00000384886 86 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 RNU6-493P-201ENST00000391321 108 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 Z98742.3-201ENST00000418637 326 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 snoU13.23-201ENST00000458863 104 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 RNU6-182P-201ENST00000516970 105 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 AL929325.1-201ENST00000603096 117 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 AC022217.4-201ENST00000604389 163 ntBASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCM2LQ9NUG4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 AC068700.1-201ENST00000565862 3754 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 RNU6-923P-201ENST00000364753 107 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 MIR626-201ENST00000385032 94 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 AL512604.1-201ENST00000404812 257 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 RN7SKP192-201ENST00000411291 327 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 Z98949.2-201ENST00000440996 144 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 RPS27P1-201ENST00000450552 247 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 RN7SKP164-201ENST00000516138 266 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 AC015712.3-201ENST00000559380 164 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 CTSLP2-204ENST00000629029 392 ntBASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.31□□□□□ -2.04
CCM2LQ9NUG4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 SNORA1B-201ENST00000362535 133 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 RNU4-10P-201ENST00000364383 140 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 RNU4-41P-201ENST00000364426 143 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 Y_RNA.435-201ENST00000384095 112 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 RNA5SP109-201ENST00000391010 116 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 RNU2-7P-201ENST00000410794 178 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 RNU2-64P-201ENST00000411315 191 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 AL606517.2-201ENST00000442855 241 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 RNY3P16-201ENST00000516338 101 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 AC021269.2-201ENST00000532318 330 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 AP002392.1-201ENST00000537692 208 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 JPX_2.1-201ENST00000614161 69 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 AC008555.8-201ENST00000623602 2168 ntBASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCM2LQ9NUG4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 RNU6-112P-201ENST00000363599 104 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 RNU6-969P-201ENST00000383900 105 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 RNA5SP496-201ENST00000391240 109 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 RNU6-381P-201ENST00000391259 108 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 COX6CP10-201ENST00000416832 224 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 AC108210.2-201ENST00000503681 201 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 RNA5SP481-201ENST00000516814 122 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 IGKV3-31-201ENST00000523109 329 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 DEFB122-202ENST00000569013 197 ntBASIC2.29□□□□□ -2.04
CCM2LQ9NUG4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms