Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RNU6-950P-201ENST00000384651 107 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 snosnR66.1-201ENST00000391095 99 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 COX6CP10-201ENST00000416832 224 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 HSPE1P21-201ENST00000438283 308 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 AC233266.1-201ENST00000454518 96 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 RPL23AP42-201ENST00000471152 471 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.7□□□□□ -2.14
HINT3Q9NQE9 AL929325.1-201ENST00000603096 117 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.7□□□□□ -2.14
HINT3Q9NQE9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.7□□□□□ -2.14
HINT3Q9NQE9 AC242852.1-201ENST00000612151 96 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 AC244015.1-201ENST00000622301 99 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HINT3Q9NQE9 MIR335-201ENST00000362173 94 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 SNORA1B-201ENST00000362535 133 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 RNU6-1323P-201ENST00000384025 107 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 RNU6-439P-201ENST00000384188 106 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.556-201ENST00000384677 113 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HINT3Q9NQE9 UBL5P3-201ENST00000475112 231 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 SNORA27.4-201ENST00000516650 95 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 AP002004.2-201ENST00000531656 154 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 MIR4709-201ENST00000577272 72 ntBASIC1.69□□□□□ -2.14
HINT3Q9NQE9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
HINT3Q9NQE9 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.69□□□□□ -2.14
HINT3Q9NQE9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.69□□□□□ -2.14
HINT3Q9NQE9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
HINT3Q9NQE9 AC100821.1-201ENST00000523153 2479 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HINT3Q9NQE9 RNU6-661P-201ENST00000362409 107 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 RNU6-1048P-201ENST00000364054 107 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 SNORA72.4-201ENST00000384174 132 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 RNU6-196P-201ENST00000384315 107 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 MIR676-201ENST00000390702 67 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 SNORA26.5-201ENST00000391215 123 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 RN7SKP200-201ENST00000410564 320 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 RNU2-14P-201ENST00000411053 191 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.68□□□□□ -2.14
HINT3Q9NQE9 AC104332.1-201ENST00000440471 797 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.68□□□□□ -2.14
HINT3Q9NQE9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.68□□□□□ -2.14
HINT3Q9NQE9 RNU2-56P-201ENST00000516826 190 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 AL358944.1-201ENST00000528537 144 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 AC011604.1-201ENST00000545978 196 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 AC103810.8-201ENST00000607347 118 ntBASIC1.68□□□□□ -2.14
HINT3Q9NQE9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.68□□□□□ -2.14
HINT3Q9NQE9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HINT3Q9NQE9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HINT3Q9NQE9 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.288-201ENST00000364854 92 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 U8.7-201ENST00000364940 136 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 RNU6-662P-201ENST00000384253 104 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 SNORA72-201ENST00000384339 132 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 RNU6-763P-201ENST00000390865 106 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 RNU7-34P-201ENST00000459394 64 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 AC117454.1-201ENST00000491120 168 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 RNU7-115P-201ENST00000516433 55 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 RNU7-116P-201ENST00000516940 62 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 AC024405.2-202ENST00000532731 184 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 MIR4503-201ENST00000582187 83 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 AP003357.1-201ENST00000604497 148 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 U4.1-201ENST00000620349 87 ntBASIC1.67□□□□□ -2.14
HINT3Q9NQE9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.67□□□□□ -2.14
HINT3Q9NQE9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HINT3Q9NQE9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HINT3Q9NQE9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
HINT3Q9NQE9 AC134026.1-201ENST00000623249 2239 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 RNU6-1272P-201ENST00000362776 107 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.144-201ENST00000363521 113 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 RNU6-414P-201ENST00000363705 104 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.217-201ENST00000364214 105 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 SNORA12.1-201ENST00000390873 148 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 AL445685.2-201ENST00000422551 342 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.66□□□□□ -2.14
HINT3Q9NQE9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.66□□□□□ -2.14
HINT3Q9NQE9 FTH1P12-201ENST00000432137 551 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 SNORD127-201ENST00000458892 86 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 RNU7-141P-201ENST00000459304 62 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.641-201ENST00000459414 105 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.637-201ENST00000459424 114 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HINT3Q9NQE9 AC104984.5-201ENST00000586878 94 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 POLR3GP1-201ENST00000594073 261 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 AL078604.3-201ENST00000615580 211 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 MIR548AY-201ENST00000617669 107 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 7SK.10-201ENST00000621414 298 ntBASIC1.66□□□□□ -2.14
HINT3Q9NQE9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HINT3Q9NQE9 UBE2WP1-201ENST00000362030 340 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.44-201ENST00000362676 108 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.265-201ENST00000364677 108 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 RNU6-574P-201ENST00000384265 107 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 RNU6-463P-201ENST00000384340 107 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 MIR504-201ENST00000385065 83 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms