Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORA48.3-201ENST00000391081 134 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 AL023284.1-201ENST00000403956 276 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 MIR1298-201ENST00000408783 112 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.45□□□□□ -2.02
VTA1Q9NP79 AC108210.2-201ENST00000503681 201 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 RNU7-193P-201ENST00000516723 65 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 AC127455.1-201ENST00000565496 145 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 Z83818.1-201ENST00000603584 150 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 AC073413.2-201ENST00000604332 360 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 AL008718.3-201ENST00000610217 321 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 MIR6895-201ENST00000613497 78 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 U6.108-201ENST00000637764 58 ntBASIC2.45□□□□□ -2.02
VTA1Q9NP79 Y_RNA.199-201ENST00000364014 102 ntBASIC2.44□□□□□ -2.02
VTA1Q9NP79 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.44□□□□□ -2.02
VTA1Q9NP79 RNU6-950P-201ENST00000384651 107 ntBASIC2.44□□□□□ -2.02
VTA1Q9NP79 MIR526A2-201ENST00000390198 65 ntBASIC2.44□□□□□ -2.02
VTA1Q9NP79 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
VTA1Q9NP79 MTCO2P33-201ENST00000402100 465 ntBASIC2.44□□□□□ -2.02
VTA1Q9NP79 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.44□□□□□ -2.02
VTA1Q9NP79 RNU2-19P-201ENST00000517288 84 ntBASIC2.44□□□□□ -2.02
VTA1Q9NP79 MIR2681-201ENST00000581814 105 ntBASIC2.44□□□□□ -2.02
VTA1Q9NP79 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.44□□□□□ -2.02
VTA1Q9NP79 MIR6079-201ENST00000635807 62 ntBASIC2.44□□□□□ -2.02
VTA1Q9NP79 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.44□□□□□ -2.02
VTA1Q9NP79 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.44□□□□□ -2.02
VTA1Q9NP79 AC100821.1-201ENST00000523153 2479 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 Y_RNA.83-201ENST00000363005 113 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 Y_RNA.172-201ENST00000363765 102 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 RNU6-674P-201ENST00000363831 107 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 Y_RNA.785-201ENST00000384290 109 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 MIR597-201ENST00000384968 97 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 SNORD23.1-201ENST00000408212 104 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 AL138752.1-201ENST00000452964 351 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 AL163195.1-201ENST00000496941 348 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.43□□□□□ -2.02
VTA1Q9NP79 RNU6-63P-201ENST00000516690 95 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 AC024405.2-202ENST00000532731 184 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 AC091178.2-201ENST00000584401 117 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 AC090425.1-201ENST00000610007 140 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 ZNF355P-201ENST00000427301 3216 ntBASIC2.43□□□□□ -2.02
VTA1Q9NP79 U8.7-201ENST00000364940 136 ntBASIC2.42□□□□□ -2.02
VTA1Q9NP79 SNORA36B-201ENST00000410438 131 ntBASIC2.42□□□□□ -2.02
VTA1Q9NP79 Y_RNA.626-201ENST00000411288 95 ntBASIC2.42□□□□□ -2.02
VTA1Q9NP79 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.42□□□□□ -2.02
VTA1Q9NP79 AC011921.3-201ENST00000605540 361 ntBASIC2.42□□□□□ -2.02
VTA1Q9NP79 Y_RNA.802-201ENST00000614892 130 ntBASIC2.42□□□□□ -2.02
VTA1Q9NP79 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
VTA1Q9NP79 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
VTA1Q9NP79 SNORA8.3-201ENST00000384679 139 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 RNU2-14P-201ENST00000411053 191 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 RNA5SP450-201ENST00000411206 102 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 RPL23AP42-201ENST00000471152 471 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 AC117454.1-201ENST00000491120 168 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 RNU6-1096P-201ENST00000517089 102 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 AP002004.2-201ENST00000531656 154 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 AC011604.1-201ENST00000545978 196 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 AC084364.2-201ENST00000546924 395 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 SUB1P4-201ENST00000566062 339 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 MIR5694-201ENST00000581190 76 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 AL365265.1-201ENST00000621045 234 ntBASIC2.41□□□□□ -2.02
VTA1Q9NP79 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VTA1Q9NP79 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
VTA1Q9NP79 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VTA1Q9NP79 RNU6-482P-201ENST00000391068 107 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 AL512604.1-201ENST00000404812 257 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 RNU6-651P-201ENST00000411040 105 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 AL445646.1-201ENST00000431784 216 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 RPS4XP11-201ENST00000446897 772 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 RNU6-437P-201ENST00000459408 95 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 RPL23AP54-201ENST00000495129 419 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 SNORD116-28-201ENST00000516123 91 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 RNU7-28P-201ENST00000516759 62 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 MIR5094-201ENST00000578766 85 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.4□□□□□ -2.03
VTA1Q9NP79 MIR411-201ENST00000362239 96 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 Y_RNA.293-201ENST00000364908 93 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 MIR520A-201ENST00000384862 85 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 RNA5SP496-201ENST00000391240 109 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 RNA5SP501-201ENST00000410990 112 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 AC055731.1-201ENST00000474387 401 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 AC130289.1-201ENST00000577321 73 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 MIR4724-201ENST00000579485 89 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 AC005336.3-201ENST00000623833 2679 ntBASIC2.39□□□□□ -2.03
VTA1Q9NP79 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
VTA1Q9NP79 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VTA1Q9NP79 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VTA1Q9NP79 MIR367-201ENST00000362299 68 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 Y_RNA.29-201ENST00000362570 113 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 RNU6-1048P-201ENST00000364054 107 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 SNORA63D-201ENST00000364359 132 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.38□□□□□ -2.03
VTA1Q9NP79 AC091021.1-201ENST00000468051 388 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 RNU6-1007P-201ENST00000516586 107 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 RNA5SP481-201ENST00000516814 122 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 AC100767.1-201ENST00000528178 123 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 AC012640.5-201ENST00000623897 319 ntBASIC2.38□□□□□ -2.03
VTA1Q9NP79 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VTA1Q9NP79 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VTA1Q9NP79 AC134026.1-201ENST00000623249 2239 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms