Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.9□□□□□ -1.95
SSU72Q9NP77 SNORA51-201ENST00000606420 132 ntBASIC2.9□□□□□ -1.95
SSU72Q9NP77 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SSU72Q9NP77 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.95
SSU72Q9NP77 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSU72Q9NP77 Y_RNA.99-201ENST00000363138 105 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 SNORA9.2-201ENST00000365361 133 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 U8.9-201ENST00000365667 134 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 Y_RNA.495-201ENST00000384435 112 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 RNU6-1072P-201ENST00000384703 107 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 RNU6-443P-201ENST00000384780 107 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SSU72Q9NP77 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.89□□□□□ -1.95
SSU72Q9NP77 GOT2P5-201ENST00000433995 546 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 SNRPGP14-201ENST00000435400 219 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.89□□□□□ -1.95
SSU72Q9NP77 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.89□□□□□ -1.95
SSU72Q9NP77 RNU6-113P-201ENST00000516653 101 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.89□□□□□ -1.95
SSU72Q9NP77 MIR5197-201ENST00000583721 112 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 AC006130.2-201ENST00000586202 326 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 AC087685.1-201ENST00000587507 141 ntBASIC2.89□□□□□ -1.95
SSU72Q9NP77 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.89□□□□□ -1.95
SSU72Q9NP77 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SSU72Q9NP77 SNORA54-201ENST00000384281 123 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 Y_RNA.549-201ENST00000384657 102 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 MIR554-201ENST00000384874 96 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 RNU6-554P-201ENST00000410466 106 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 RN7SKP220-201ENST00000410611 288 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 RN7SKP27-201ENST00000410684 333 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 AC099677.2-201ENST00000436385 175 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 ATP5J2P3-201ENST00000451550 258 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 AL049830.1-201ENST00000468034 425 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 MIR4762-201ENST00000585261 75 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 AC019176.2-201ENST00000611579 315 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 AL137067.1-201ENST00000615933 120 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 AC012442.3-202ENST00000636742 206 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
SSU72Q9NP77 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
SSU72Q9NP77 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.87□□□□□ -1.95
SSU72Q9NP77 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSU72Q9NP77 SNORA8-201ENST00000384574 139 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 RNU11-5P-201ENST00000391216 129 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 AL606517.2-201ENST00000442855 241 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 TRBV12-1-201ENST00000479785 344 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 RN7SL636P-201ENST00000497504 294 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 RNU6-826P-201ENST00000516827 104 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 AP002004.2-201ENST00000531656 154 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 AC007012.1-201ENST00000567192 175 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 MIR5582-201ENST00000579697 68 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 AC022217.4-201ENST00000604389 163 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 AC006441.5-201ENST00000612680 209 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 AC039056.2-201ENST00000622261 511 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 AC022513.1-201ENST00000624512 117 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 AC096644.4-201ENST00000563417 2912 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSU72Q9NP77 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSU72Q9NP77 AC080100.1-201ENST00000624239 5356 ntBASIC2.87□□□□□ -1.95
SSU72Q9NP77 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.86□□□□□ -1.95
SSU72Q9NP77 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.86□□□□□ -1.95
SSU72Q9NP77 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.86□□□□□ -1.95
SSU72Q9NP77 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSU72Q9NP77 MIR26A1-201ENST00000362205 77 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 RNU6-862P-201ENST00000362804 105 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 SNORA26.7-201ENST00000391288 122 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 RNA5SP136-201ENST00000410906 107 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 AC007064.1-201ENST00000412238 351 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.86□□□□□ -1.95
SSU72Q9NP77 AL031737.1-201ENST00000450125 223 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 RN7SL601P-201ENST00000471221 293 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 RN7SL293P-201ENST00000481765 281 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 RPS26P48-201ENST00000491713 339 ntBASIC2.86□□□□□ -1.95
SSU72Q9NP77 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.86□□□□□ -1.95
SSU72Q9NP77 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SSU72Q9NP77 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SSU72Q9NP77 RNA5SP493-201ENST00000364115 91 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 RNU6-268P-201ENST00000364174 107 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 U8.5-201ENST00000364528 136 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 SNORA62.3-201ENST00000365110 153 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 MIR570-201ENST00000384917 97 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 PTMAP2-201ENST00000397627 327 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 MIR548O-201ENST00000408583 114 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 RNU6-938P-201ENST00000411285 103 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.85□□□□□ -1.95
SSU72Q9NP77 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.85□□□□□ -1.95
SSU72Q9NP77 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.85□□□□□ -1.95
SSU72Q9NP77 AC003982.1-202ENST00000469928 248 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 RNU7-25P-201ENST00000516544 62 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 MIR3169-201ENST00000578032 83 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.85□□□□□ -1.95
SSU72Q9NP77 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.85□□□□□ -1.95
SSU72Q9NP77 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SSU72Q9NP77 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
SSU72Q9NP77 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSU72Q9NP77 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.84□□□□□ -1.95
SSU72Q9NP77 Y_RNA.85-201ENST00000363014 111 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 RNU6-1107P-201ENST00000364817 104 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 RNU6-32P-201ENST00000383948 107 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 RNU6-13P-201ENST00000384248 107 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 RNU6-12P-201ENST00000384604 107 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms