Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 OR9P1P-201ENST00000496431 281 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 RNU6-1096P-201ENST00000517089 102 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 RN7SKP295-201ENST00000517264 153 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 PART1_1.1-201ENST00000611761 217 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 AC040896.1-201ENST00000613819 479 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 AL138825.1-201ENST00000618587 192 ntBASIC1.34□□□□□ -2.19
RPF1Q9H9Y2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
RPF1Q9H9Y2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 RNU6-324P-201ENST00000363957 106 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.431-201ENST00000384086 102 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.535-201ENST00000384612 99 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 SNX2P2-201ENST00000424553 323 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 HSPE1P13-201ENST00000451143 297 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 AC233266.1-201ENST00000454518 96 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.673-201ENST00000516306 88 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 RNU2-56P-201ENST00000516826 190 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 AC040926.1-201ENST00000530195 238 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 RPS29P30-201ENST00000600975 111 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 AL121655.1-201ENST00000605811 308 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 AC242852.1-201ENST00000612151 96 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 AC073349.3-201ENST00000617616 186 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 AC090971.5-201ENST00000621102 293 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 AC244015.1-201ENST00000622301 99 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 AL160413.1-201ENST00000622780 310 ntBASIC1.33□□□□□ -2.2
RPF1Q9H9Y2 SNORD81.1-201ENST00000363064 77 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.329-201ENST00000365209 107 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 RNU6-937P-201ENST00000384325 106 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.645-201ENST00000391229 102 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 U8.16-201ENST00000391279 133 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 MIR1302-11-201ENST00000408051 138 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 MIR1302-9-201ENST00000408365 138 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 MIR1302-10-201ENST00000408734 138 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 AL162725.1-201ENST00000435405 301 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 SNORA70.12-201ENST00000516084 153 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 RNA5SP168-201ENST00000516642 112 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 AP002004.2-201ENST00000531656 154 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 MIR4778-201ENST00000577635 80 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 AL162424.1-201ENST00000602325 221 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.772-201ENST00000606692 102 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 MIR1302-2-201ENST00000607096 138 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 AL513423.1-201ENST00000621695 132 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 SNORD3E-202ENST00000627253 216 ntBASIC1.32□□□□□ -2.2
RPF1Q9H9Y2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.138-201ENST00000363462 102 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.148-201ENST00000363557 117 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 RNU4-41P-201ENST00000364426 143 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.445-201ENST00000384168 102 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.471-201ENST00000384312 102 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 RNU6-424P-201ENST00000384367 105 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 MIR520G-201ENST00000385064 90 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 MIR660-201ENST00000385235 97 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 Z98949.2-201ENST00000440996 144 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 RPS4XP11-201ENST00000446897 772 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 RNU6-475P-201ENST00000516073 104 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 AC004832.4-201ENST00000608952 331 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.31□□□□□ -2.2
RPF1Q9H9Y2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 MIRLET7C-201ENST00000362160 84 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.143-201ENST00000363520 106 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.331-201ENST00000365267 102 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 SNORD14.1-201ENST00000365609 90 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.462-201ENST00000384268 102 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 RNU11-5P-201ENST00000391216 129 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 RNU4-30P-201ENST00000410245 143 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 AC005042.3-201ENST00000453230 174 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 AC092991.1-201ENST00000477176 376 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 AC093852.1-201ENST00000503587 266 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 SNORA25.10-201ENST00000515926 124 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 SNORA28-201ENST00000606769 126 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 AC090574.1-201ENST00000623186 233 ntBASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
RPF1Q9H9Y2 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.439-201ENST00000384119 94 ntBASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.460-201ENST00000384255 102 ntBASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 MIR562-201ENST00000384894 95 ntBASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 AC093850.1-201ENST00000454121 251 ntBASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 U8.20-201ENST00000459445 131 ntBASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 AL049830.1-201ENST00000468034 425 ntBASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.29□□□□□ -2.2
RPF1Q9H9Y2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 RNU4-50P-201ENST00000364361 141 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 RNU6-450P-201ENST00000364654 107 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 RNU6-53P-201ENST00000365367 106 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.551-201ENST00000384661 102 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 MIR1276-201ENST00000408707 83 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 RPS20P10-201ENST00000451209 253 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms