Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 Y_RNA.52-201ENST00000362760 96 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 RNA5SP467-201ENST00000391274 118 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 AL603914.1-201ENST00000401964 204 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 RNU2-48P-201ENST00000410694 191 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 CYP2C59P-201ENST00000457790 269 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 AC011406.1-201ENST00000512440 370 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-589P-201ENST00000516485 107 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-365P-201ENST00000517113 106 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 AC007751.1-201ENST00000529260 376 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 MIR3129-201ENST00000581095 76 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 U6.95-201ENST00000636931 70 ntBASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SEC61A2Q9H9S3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 SNORD58C-201ENST00000365223 64 ntBASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 SNORA1-201ENST00000384107 130 ntBASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 SNORA26-201ENST00000391286 122 ntBASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 AL049873.1-201ENST00000480540 376 ntBASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 AL670379.3-201ENST00000605040 251 ntBASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SEC61A2Q9H9S3 ICE2P2-201ENST00000483823 2787 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 SNORA80A-201ENST00000363922 136 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 SNORD21-201ENST00000383953 95 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 MIR592-201ENST00000384959 97 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 MIR520G-201ENST00000385064 90 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 MIR95-201ENST00000385072 81 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 MIR548A3-201ENST00000385297 97 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 RNU2-63P-201ENST00000410792 194 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 RNA5SP127-201ENST00000411051 133 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 COTL1P1-201ENST00000422309 375 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 SNRPGP10-201ENST00000432323 225 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 RPS15AP28-201ENST00000435088 386 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 AC107083.1-201ENST00000439643 279 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 RPS26P45-201ENST00000471748 340 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 MRPS17P9-201ENST00000511924 393 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-1270P-201ENST00000517128 108 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-667P-201ENST00000517186 102 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 CYCSP26-201ENST00000534107 320 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 AC004486.1-201ENST00000546846 233 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 AC079600.2-201ENST00000550076 130 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 ZNF861P-201ENST00000588126 639 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 AL022345.2-201ENST00000606307 135 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 AL121890.5-201ENST00000620848 304 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 AL365361.1-201ENST00000566942 3481 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.5□□□□□ -2.01
SEC61A2Q9H9S3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 RNU1-96P-201ENST00000364163 162 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 SNORD72-201ENST00000390994 80 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 MIR1289-1-201ENST00000408836 144 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 RPS29P6-201ENST00000438196 145 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 HMGN1P7-201ENST00000491722 313 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 AC091826.1-201ENST00000514065 313 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 RN7SKP132-201ENST00000516001 208 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 SNORA48.11-201ENST00000517015 89 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 MIR4662B-201ENST00000579498 81 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 AC007229.1-201ENST00000590455 412 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 AC022217.4-201ENST00000604389 163 ntBASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.49□□□□□ -2.01
SEC61A2Q9H9S3 Y_RNA.35-201ENST00000362601 101 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 SNORA33-201ENST00000363664 130 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-647P-201ENST00000364243 107 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 SNORD116-21-201ENST00000384507 92 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 MIR548A1-201ENST00000385041 97 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 MIR624-201ENST00000385217 97 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 EDDM3CP-201ENST00000415977 425 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 RN7SL297P-201ENST00000483161 293 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 RNU7-99P-201ENST00000516271 62 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 SNORA9.3-201ENST00000516383 129 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-504P-201ENST00000516568 104 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 SCARNA13-201ENST00000516672 275 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 RNU7-128P-201ENST00000517247 62 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 MIR3613-201ENST00000579844 87 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 AC091178.2-201ENST00000584401 117 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms