Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RPAP3Q9H6T3 MIR625-201ENST00000385047 85 ntBASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 AL451046.2-201ENST00000403074 277 ntBASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.592-201ENST00000410274 109 ntBASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 PIGPP3-201ENST00000425307 415 ntBASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 MTND1P2-201ENST00000430604 821 ntBASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 RNA5SP480-201ENST00000516840 109 ntBASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 AC011476.5-201ENST00000615594 130 ntBASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.02□□□□□ -2.25
RPAP3Q9H6T3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 SNORD114-7-201ENST00000362520 77 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 RNU6-1188P-201ENST00000363795 107 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 SNORA2.2-201ENST00000365473 135 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 RNU6-890P-201ENST00000384121 107 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 SNORA75.6-201ENST00000391318 127 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.599-201ENST00000410489 109 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 AC096644.2-201ENST00000429278 159 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 RNU6-322P-201ENST00000516010 103 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 RNU6-264P-201ENST00000517134 104 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 RNU2-12P-201ENST00000517216 168 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 AC022306.2-201ENST00000617563 647 ntBASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
RPAP3Q9H6T3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
RPAP3Q9H6T3 SNORD68-201ENST00000363214 84 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 SNORD115-30-201ENST00000364117 82 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.361-201ENST00000365515 120 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.505-201ENST00000384489 102 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1□□□□□ -2.25
RPAP3Q9H6T3 AL354751.2-201ENST00000415471 210 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 MRPS18CP6-201ENST00000423587 223 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 CEP57L1P1-201ENST00000430943 1201 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 MTCO3P10-201ENST00000455912 772 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 SNORA31.4-201ENST00000516049 129 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 AL358944.1-201ENST00000528537 144 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 MIR5690-201ENST00000583739 73 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 FAM71BP1-201ENST00000604431 523 ntBASIC1□□□□□ -2.25
RPAP3Q9H6T3 RNU4-79P-201ENST00000362764 141 ntBASIC0.99□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.99□□□□□ -2.25
RPAP3Q9H6T3 RNU6-708P-201ENST00000384217 107 ntBASIC0.99□□□□□ -2.25
RPAP3Q9H6T3 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
RPAP3Q9H6T3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.99□□□□□ -2.25
RPAP3Q9H6T3 SNORD116-13-201ENST00000384408 92 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 RNU6-342P-201ENST00000384521 104 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 MIR526A1-201ENST00000384897 85 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 MIR7-2-201ENST00000384970 110 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.605-201ENST00000410577 105 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 ELOCP24-201ENST00000456370 334 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 RNU6-966P-201ENST00000516479 104 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 DEFB108E-201ENST00000524692 240 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 AC108706.1-201ENST00000611053 297 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 MTND4LP32-201ENST00000636111 270 ntBASIC0.98□□□□□ -2.25
RPAP3Q9H6T3 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 Y_RNA.474-201ENST00000384341 102 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 RNU6-163P-201ENST00000384396 106 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 AL162725.1-201ENST00000435405 301 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 FCF1P4-201ENST00000448326 183 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 SNORD124-201ENST00000459577 104 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 RNU6-470P-201ENST00000515954 104 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 RNU6-559P-201ENST00000516151 98 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 AL357312.1-201ENST00000603879 298 ntBASIC0.97□□□□□ -2.25
RPAP3Q9H6T3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 RNU6-324P-201ENST00000363957 106 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 RNU1-133P-201ENST00000364867 167 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 Y_RNA.314-201ENST00000365114 102 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 MIR891A-201ENST00000401237 79 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 AC114811.1-201ENST00000507207 168 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 RNU7-4P-201ENST00000516961 62 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 AC144568.1-201ENST00000520139 137 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 AC006380.1-201ENST00000603598 186 ntBASIC0.96□□□□□ -2.26
RPAP3Q9H6T3 RNU6-626P-201ENST00000363354 107 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 RNU6-833P-201ENST00000363486 107 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 RNU6-20P-201ENST00000384106 107 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 RNY3P4-201ENST00000384428 101 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 AL031003.1-201ENST00000404229 172 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 RNU2-64P-201ENST00000411315 191 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 MLLT10P1-201ENST00000418346 262 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 AC004941.2-201ENST00000427009 228 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 AC002429.1-201ENST00000437672 148 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 RPL39P39-201ENST00000455840 151 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 SNORA70.12-201ENST00000516084 153 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 MIR4714-201ENST00000580728 77 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 AC120024.3-201ENST00000603167 156 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 AC113139.1-201ENST00000605049 239 ntBASIC0.95□□□□□ -2.26
RPAP3Q9H6T3 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms