Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 Z98949.2-201ENST00000440996 144 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 RPEP5-201ENST00000441137 268 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.21□□□□□ -2.22
RNF41Q9H4P4 MTND4P19-201ENST00000446659 478 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AC010655.3-201ENST00000478818 450 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.21□□□□□ -2.22
RNF41Q9H4P4 RNU6-1170P-201ENST00000515974 106 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 RNU6-475P-201ENST00000516073 104 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AL121655.1-201ENST00000605811 308 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 AC073349.3-201ENST00000617616 186 ntBASIC1.21□□□□□ -2.22
RNF41Q9H4P4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.2□□□□□ -2.22
RNF41Q9H4P4 AC005592.1-201ENST00000566527 1640 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.431-201ENST00000384086 102 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 SNORD116-13-201ENST00000384408 92 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.645-201ENST00000391229 102 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.604-201ENST00000410574 102 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 RNU6-130P-201ENST00000411112 103 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 AC022028.1-201ENST00000412054 408 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.2□□□□□ -2.22
RNF41Q9H4P4 MCFD2P1-201ENST00000417812 300 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 MTND1P14-201ENST00000427400 950 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 STAG3L5P-204ENST00000443759 179 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.2□□□□□ -2.22
RNF41Q9H4P4 SNORA25.10-201ENST00000515926 124 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 RNU6-155P-201ENST00000516347 100 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 RNA5SP168-201ENST00000516642 112 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 RN7SKP295-201ENST00000517264 153 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 AL358944.1-201ENST00000528537 144 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 AC006380.1-201ENST00000603598 186 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 PART1_1.1-201ENST00000611761 217 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 AL138825.1-201ENST00000618587 192 ntBASIC1.2□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.61-201ENST00000362835 102 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 SNORD63-201ENST00000384262 68 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 RNU6-424P-201ENST00000384367 105 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 MIR520G-201ENST00000385064 90 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 MIR660-201ENST00000385235 97 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 RNU6-308P-201ENST00000390957 107 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 U8.16-201ENST00000391279 133 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 CALM2P4-201ENST00000430810 426 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 RPS4XP11-201ENST00000446897 772 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 RNU7-28P-201ENST00000516759 62 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 AP002004.2-201ENST00000531656 154 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 AL078604.3-201ENST00000615580 211 ntBASIC1.19□□□□□ -2.22
RNF41Q9H4P4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RNF41Q9H4P4 RNU4-41P-201ENST00000364426 143 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 RNA5SP259-201ENST00000365541 109 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.535-201ENST00000384612 99 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 MIR562-201ENST00000384894 95 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 RNU11-5P-201ENST00000391216 129 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.18□□□□□ -2.22
RNF41Q9H4P4 AL135790.2-201ENST00000437701 267 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 AL049830.1-201ENST00000468034 425 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.18□□□□□ -2.22
RNF41Q9H4P4 SNORA70.12-201ENST00000516084 153 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 AC040926.1-201ENST00000530195 238 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.18□□□□□ -2.22
RNF41Q9H4P4 RPS29P30-201ENST00000600975 111 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 SNORA28-201ENST00000606769 126 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 AC040896.1-201ENST00000613819 479 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 AL160413.1-201ENST00000622780 310 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 SNORD3E-202ENST00000627253 216 ntBASIC1.18□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 MIR653-201ENST00000385279 96 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 RNA5SP482-201ENST00000391269 118 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 RPL39P38-201ENST00000467018 153 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 AL512310.8-201ENST00000550183 120 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 MIR3664-201ENST00000579074 99 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 AC104695.3-201ENST00000604052 296 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 AC004832.4-201ENST00000608952 331 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 AL121890.5-201ENST00000620848 304 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 AC090971.5-201ENST00000621102 293 ntBASIC1.17□□□□□ -2.22
RNF41Q9H4P4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RNF41Q9H4P4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.16□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.28-201ENST00000362554 111 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.148-201ENST00000363557 117 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 SNORD14.1-201ENST00000365609 90 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 RNU6-937P-201ENST00000384325 106 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.551-201ENST00000384661 102 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 SNX2P2-201ENST00000424553 323 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.16□□□□□ -2.22
RNF41Q9H4P4 AC005042.3-201ENST00000453230 174 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 U8.20-201ENST00000459445 131 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 AC092991.1-201ENST00000477176 376 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 RNU2-56P-201ENST00000516826 190 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 RNA5SP102-201ENST00000516865 106 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 MIR3937-201ENST00000580135 106 ntBASIC1.16□□□□□ -2.22
RNF41Q9H4P4 Y_RNA.138-201ENST00000363462 102 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms