Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 MIR4778-201ENST00000577635 80 ntBASIC1.35□□□□□ -2.19
SNX25Q9H3E2 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
SNX25Q9H3E2 RPS29P30-201ENST00000600975 111 ntBASIC1.35□□□□□ -2.19
SNX25Q9H3E2 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
SNX25Q9H3E2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.35□□□□□ -2.19
SNX25Q9H3E2 SNORD81.1-201ENST00000363064 77 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 Y_RNA.431-201ENST00000384086 102 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 Y_RNA.462-201ENST00000384268 102 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 MIR1302-11-201ENST00000408051 138 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 MIR1302-9-201ENST00000408365 138 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 MIR1302-10-201ENST00000408734 138 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 SNX2P2-201ENST00000424553 323 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 MTND4P19-201ENST00000446659 478 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 RPS4XP11-201ENST00000446897 772 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 TRMT112P2-201ENST00000512910 132 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 RNU6-475P-201ENST00000516073 104 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 Y_RNA.772-201ENST00000606692 102 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 MIR1302-2-201ENST00000607096 138 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 AC106754.2-201ENST00000623006 233 ntBASIC1.34□□□□□ -2.19
SNX25Q9H3E2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SNX25Q9H3E2 MTND4P29-201ENST00000503122 1372 ntBASIC1.34□□□□□ -2.2
SNX25Q9H3E2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SNX25Q9H3E2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SNX25Q9H3E2 RNU4-41P-201ENST00000364426 143 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.329-201ENST00000365209 107 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 RNU6-308P-201ENST00000390957 107 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 RNU6-130P-201ENST00000411112 103 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 MCFD2P1-201ENST00000417812 300 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 PMCHL1-202ENST00000423102 261 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 RPL39P38-201ENST00000467018 153 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 AL049830.1-201ENST00000468034 425 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 AC092991.1-201ENST00000477176 376 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 AC005840.1-201ENST00000498412 377 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.33□□□□□ -2.2
SNX25Q9H3E2 AL512310.8-201ENST00000550183 120 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 MIR3664-201ENST00000579074 99 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 PART1_1.1-201ENST00000611761 217 ntBASIC1.33□□□□□ -2.2
SNX25Q9H3E2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SNX25Q9H3E2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.813-201ENST00000364639 102 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.394-201ENST00000383942 103 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 RNU6-474P-201ENST00000384243 107 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 SNORD63-201ENST00000384262 68 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 RNA5SP482-201ENST00000391269 118 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.32□□□□□ -2.2
SNX25Q9H3E2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.32□□□□□ -2.2
SNX25Q9H3E2 AC005042.3-201ENST00000453230 174 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 AC010655.3-201ENST00000478818 450 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 SNORA25.10-201ENST00000515926 124 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.32□□□□□ -2.2
SNX25Q9H3E2 AC040926.1-201ENST00000530195 238 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 AC004832.4-201ENST00000608952 331 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.32□□□□□ -2.2
SNX25Q9H3E2 SNORD14.1-201ENST00000365609 90 ntBASIC1.31□□□□□ -2.2
SNX25Q9H3E2 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.645-201ENST00000391229 102 ntBASIC1.31□□□□□ -2.2
SNX25Q9H3E2 RNU6-321P-201ENST00000410912 106 ntBASIC1.31□□□□□ -2.2
SNX25Q9H3E2 AC015922.2-201ENST00000435593 184 ntBASIC1.31□□□□□ -2.2
SNX25Q9H3E2 U8.20-201ENST00000459445 131 ntBASIC1.31□□□□□ -2.2
SNX25Q9H3E2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.31□□□□□ -2.2
SNX25Q9H3E2 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
SNX25Q9H3E2 AC090971.5-201ENST00000621102 293 ntBASIC1.31□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.61-201ENST00000362835 102 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.143-201ENST00000363520 106 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 RNU4-76P-201ENST00000364509 141 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.439-201ENST00000384119 94 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 RNU6-937P-201ENST00000384325 106 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.526-201ENST00000384572 110 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.551-201ENST00000384661 102 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 MIR653-201ENST00000385279 96 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.621-201ENST00000411065 96 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 AL390729.2-201ENST00000416137 156 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 RPS20P10-201ENST00000451209 253 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 AC093850.1-201ENST00000454121 251 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.3□□□□□ -2.2
SNX25Q9H3E2 AL160413.1-201ENST00000622780 310 ntBASIC1.3□□□□□ -2.2
SNX25Q9H3E2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.3□□□□□ -2.2
SNX25Q9H3E2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SNX25Q9H3E2 RNU4-50P-201ENST00000364361 141 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.331-201ENST00000365267 102 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.471-201ENST00000384312 102 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.535-201ENST00000384612 99 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.604-201ENST00000410574 102 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 RNU6-917P-201ENST00000516294 104 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 AC011373.1-201ENST00000607270 237 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 AC091895.1-201ENST00000624494 256 ntBASIC1.29□□□□□ -2.2
SNX25Q9H3E2 RNU6-199P-201ENST00000362954 107 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.148-201ENST00000363557 117 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.310-201ENST00000365063 113 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 Y_RNA.445-201ENST00000384168 102 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms