Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
CRNKL1Q9BZJ0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 SNORD114-7-201ENST00000362520 77 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 Y_RNA.172-201ENST00000363765 102 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 SNORD116-13-201ENST00000384408 92 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 MIR562-201ENST00000384894 95 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 MIR520G-201ENST00000385064 90 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 MIR559-201ENST00000385188 96 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-910P-201ENST00000390844 107 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 AC004941.2-201ENST00000427009 228 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 AC104332.1-201ENST00000440471 797 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 SUMO1P2-201ENST00000452524 304 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 AC233266.1-201ENST00000454518 96 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 ELOCP24-201ENST00000456370 334 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RNU7-169P-201ENST00000459456 61 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-470P-201ENST00000515954 104 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RNU7-12P-201ENST00000516030 62 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-559P-201ENST00000516151 98 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-1337P-201ENST00000516525 95 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 AC242852.1-201ENST00000612151 96 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 MIR6515-201ENST00000619843 57 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 AC244015.1-201ENST00000622301 99 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 AC138305.3-201ENST00000624988 240 ntBASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CRNKL1Q9BZJ0 RNU4-79P-201ENST00000362764 141 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-1283P-201ENST00000365314 105 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-708P-201ENST00000384217 107 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 RNY3P4-201ENST00000384428 101 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 SNORD116-29-201ENST00000384516 83 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AL031003.1-201ENST00000404229 172 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-1199P-201ENST00000411249 104 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-1054P-201ENST00000411293 104 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AC138393.2-201ENST00000414742 246 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AC245047.7-201ENST00000440265 293 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 CHEK2P4-201ENST00000450340 246 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 snoU13.25-201ENST00000458945 104 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-351P-201ENST00000516097 100 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-277P-201ENST00000516272 106 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 MIR5000-201ENST00000577717 103 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AC113139.1-201ENST00000605049 239 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AL355073.2-201ENST00000612106 557 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AC011476.5-201ENST00000615594 130 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 AC240442.1-201ENST00000616055 283 ntBASIC0.95□□□□□ -2.26
CRNKL1Q9BZJ0 SNORA2.2-201ENST00000365473 135 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-1310P-201ENST00000384153 107 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 AL451046.2-201ENST00000403074 277 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 AL162725.1-201ENST00000435405 301 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-1012P-201ENST00000516606 109 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 AL358944.1-201ENST00000528537 144 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 MIR5690-201ENST00000583739 73 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 MTND4LP32-201ENST00000636111 270 ntBASIC0.94□□□□□ -2.26
CRNKL1Q9BZJ0 MIR613-201ENST00000385248 95 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 SNORD12-201ENST00000391002 90 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 RNU2-54P-201ENST00000410299 190 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 AC098614.3-201ENST00000438957 440 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 FCF1P4-201ENST00000448326 183 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 Y_RNA.653-201ENST00000459091 95 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-264P-201ENST00000517134 104 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 AL591926.4-201ENST00000616895 298 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 AL008636.1-201ENST00000625038 1018 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 AC099654.14-201ENST00000638599 341 ntBASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
CRNKL1Q9BZJ0 Y_RNA.112-201ENST00000363250 102 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 RNU2-61P-201ENST00000411069 191 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 PIGPP3-201ENST00000425307 415 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 AC096644.2-201ENST00000429278 159 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 SNORA25.10-201ENST00000515926 124 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-947P-201ENST00000516264 106 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 RNU7-4P-201ENST00000516961 62 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 AC120024.3-201ENST00000603167 156 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 AL020996.3-201ENST00000606617 222 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 AC004832.4-201ENST00000608952 331 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 AL096861.1-201ENST00000610899 123 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 U6.92-201ENST00000636464 89 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CRNKL1Q9BZJ0 RNU6-20P-201ENST00000384106 107 ntBASIC0.91□□□□□ -2.26
CRNKL1Q9BZJ0 SNORD78.2-201ENST00000391076 69 ntBASIC0.91□□□□□ -2.26
CRNKL1Q9BZJ0 RNY4P36-201ENST00000391116 96 ntBASIC0.91□□□□□ -2.26
CRNKL1Q9BZJ0 AC063976.4-201ENST00000421971 163 ntBASIC0.91□□□□□ -2.26
CRNKL1Q9BZJ0 AC093019.1-201ENST00000443135 252 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms