Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 SNORA70H-201ENST00000383910 135 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 SNORA70J-201ENST00000384182 135 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR520A-201ENST00000384862 85 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR652-201ENST00000385278 98 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR143-201ENST00000385300 106 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNU1-123P-201ENST00000458950 160 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 ACA64.4-201ENST00000459070 127 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC015795.1-201ENST00000513669 327 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNU6-68P-201ENST00000516576 104 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC027308.1-201ENST00000517993 110 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC015712.3-201ENST00000559380 164 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC008521.2-201ENST00000591021 259 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC104408.1-201ENST00000605241 170 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 RMST_2.1-201ENST00000617263 136 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 5S_rRNA.28-201ENST00000638107 119 ntBASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP9-4Q9BYQ2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR323A-201ENST00000362199 86 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNU1-150P-201ENST00000362491 162 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNU1-83P-201ENST00000363426 164 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNA5SP211-201ENST00000365516 117 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR653-201ENST00000385279 96 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 RPS26P8-201ENST00000393490 348 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 EEF1A1P41-201ENST00000414667 207 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC004552.1-201ENST00000419089 348 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 AL445665.1-202ENST00000452436 324 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 RPS26P3-201ENST00000470205 348 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC006463.2-201ENST00000473326 348 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 RPS17P15-201ENST00000475609 349 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC006539.1-201ENST00000481419 501 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 RN7SL273P-201ENST00000481561 299 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC004057.1-201ENST00000485827 348 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 RPS26P15-201ENST00000488067 348 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 SNORD46.2-201ENST00000516021 102 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 SNORD111.1-201ENST00000516421 86 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 Y_RNA.699-201ENST00000516803 93 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR3176-201ENST00000582210 90 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR6798-201ENST00000612887 67 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 AL139099.4-201ENST00000614802 114 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR6516-201ENST00000630554 81 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 OTUD4P1-201ENST00000237841 3067 ntBASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP9-4Q9BYQ2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
KRTAP9-4Q9BYQ2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC1.71□□□□□ -2.13
KRTAP9-4Q9BYQ2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
KRTAP9-4Q9BYQ2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 DMD-211ENST00000378707 7410 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP9-4Q9BYQ2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 243.2 ms